Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 RNA5SP283-201ENST00000365604 119 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.571-201ENST00000384753 98 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 RNU6-855P-201ENST00000410395 104 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MICF-203ENST00000432679 129 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 RPS12P18-201ENST00000442381 270 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 AC114982.1-201ENST00000469402 321 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR4738-201ENST00000579134 87 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR3684-201ENST00000579779 74 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR6875-201ENST00000617506 72 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR7157-201ENST00000635801 60 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR7515-201ENST00000637837 67 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
NLRC3Q7RTR2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NLRC3Q7RTR2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.170-201ENST00000363746 110 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 SNORA26.5-201ENST00000391215 123 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 TRBV12-2-201ENST00000489763 344 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 SEM1P1-201ENST00000506694 209 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 SCARNA3-201ENST00000517097 143 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 AC023043.3-201ENST00000593113 385 ntBASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLRC3Q7RTR2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.7-201ENST00000362352 102 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.341-201ENST00000365341 102 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.368-201ENST00000365547 113 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 MIR218-1-201ENST00000384999 110 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AL139095.1-201ENST00000404326 391 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 U6atac.2-201ENST00000408644 118 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 RNU7-57P-201ENST00000459540 60 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 SUMO2P18-201ENST00000518873 252 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AC109329.2-201ENST00000519658 482 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AC100767.1-201ENST00000528178 123 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AC013791.1-201ENST00000616619 62 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NLRC3Q7RTR2 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 SNORA72.4-201ENST00000384174 132 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.456-201ENST00000384232 111 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 MTCO2P33-201ENST00000402100 465 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 RNA5SP179-201ENST00000517284 121 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 AC018630.3-201ENST00000542637 96 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 RN7SL703P-201ENST00000578485 302 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 AC104465.1-201ENST00000611365 139 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 U2.22-201ENST00000636441 106 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 Z82209.1-201ENST00000422141 2135 ntBASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
NLRC3Q7RTR2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.8-201ENST00000362353 102 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 RNU6-1048P-201ENST00000364054 107 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 Y_RNA.238-201ENST00000364441 102 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 RNU6-804P-201ENST00000384286 107 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 RNU2-2P-201ENST00000410396 191 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 AL451074.5-201ENST00000415894 435 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
NLRC3Q7RTR2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms