Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
SMARCD3Q6STE5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SMARCD3Q6STE5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 RNU6-451P-201ENST00000362921 107 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.231-201ENST00000364358 102 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 RNU6-378P-201ENST00000384324 107 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.516-201ENST00000384541 124 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 MIR29B2-201ENST00000385055 81 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 SRIP3-201ENST00000413200 219 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 MTCO1P20-201ENST00000425366 358 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 RPL23AP95-201ENST00000426806 265 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 MTND3P9-201ENST00000429526 346 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 ERLEC1P1-201ENST00000433806 578 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AL603825.1-201ENST00000438481 80 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 MTCO2P3-201ENST00000442543 421 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 RPS29P27-201ENST00000463711 170 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC008628.2-201ENST00000502605 298 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 SNORA19.2-201ENST00000516013 114 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.665-201ENST00000516177 98 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 RN7SKP256-201ENST00000517201 314 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 TRAV32-201ENST00000553993 340 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AL162413.1-201ENST00000603198 110 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC018889.1-201ENST00000605372 397 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 FAM157A-202ENST00000615155 405 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 AC068137.3-201ENST00000639191 341 ntBASIC1.08□□□□□ -2.24
SMARCD3Q6STE5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RNU6-623P-201ENST00000363143 105 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.256-201ENST00000364594 104 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1329P-201ENST00000365664 107 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 SNORA48.1-201ENST00000390879 135 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RNU6-332P-201ENST00000391193 108 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 MIR450B-201ENST00000401182 78 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 MIR548F1-201ENST00000408667 84 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL133396.1-201ENST00000432048 687 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 SEPT14P3-201ENST00000439401 183 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL732372.2-207ENST00000445840 183 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 SEPT14P2-201ENST00000453405 183 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 snoU13.6-201ENST00000458785 104 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RPL9P9-202ENST00000466501 579 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 SEPT14P4-201ENST00000513445 186 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RNU6-720P-201ENST00000516363 108 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RNU6-612P-201ENST00000516909 102 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC087854.1-201ENST00000519706 414 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 FO082796.1-201ENST00000523795 183 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 MTND1P35-201ENST00000526739 508 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC115990.1-201ENST00000526957 301 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC087441.2-201ENST00000529141 262 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AL157687.1-201ENST00000554853 619 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 TPRKBP2-201ENST00000565969 475 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC109446.1-201ENST00000566172 220 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC023043.2-201ENST00000589678 1026 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 VN1R107P-201ENST00000601784 209 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 RMST_3.1-201ENST00000611651 109 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 FER-210ENST00000628534 558 ntTSL 5 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 MIR1321-201ENST00000637766 79 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 AC024614.3-201ENST00000637860 256 ntBASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.07□□□□□ -2.24
SMARCD3Q6STE5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC009541.1-201ENST00000438279 2662 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 RNU6-254P-201ENST00000363377 107 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 SNORD32B-201ENST00000364460 84 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 RNU6-142P-201ENST00000384019 107 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 MIR549A-201ENST00000385268 96 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 RNU1-78P-201ENST00000391248 165 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 RNA5SP201-201ENST00000410316 124 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 RN7SKP61-201ENST00000410642 295 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 MTCO1P21-201ENST00000416634 589 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AL590632.1-201ENST00000424289 371 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC078809.1-201ENST00000427601 140 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms