Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 AL139811.1-201ENST00000424779 2299 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 MAPK10-372ENST00000641954 3413 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 MIR548B-201ENST00000385247 97 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 AL133475.1-201ENST00000404414 305 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 RNA5SP201-201ENST00000410316 124 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 HMGN2P10-201ENST00000448085 265 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 RN7SL691P-201ENST00000494487 301 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 PRELID2P1-201ENST00000552837 301 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 AL606490.9-201ENST00000603331 271 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 RNA5SP108-201ENST00000605921 117 ntBASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXR1Q6PIV2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 Y_RNA.40-201ENST00000362645 93 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 RNU6-529P-201ENST00000363383 104 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 RNU6-1107P-201ENST00000364817 104 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 Y_RNA.346-201ENST00000365385 112 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 MIR488-201ENST00000365739 83 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 MIR200C-201ENST00000384980 68 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AL157831.1-201ENST00000426134 473 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 GOT2P5-201ENST00000433995 546 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 RPS29P31-201ENST00000446147 164 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AL358232.1-201ENST00000448030 501 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AC018630.3-201ENST00000542637 96 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 MIR3186-201ENST00000577404 85 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AL034555.1-201ENST00000604816 211 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 TCL6_2.1-201ENST00000615162 119 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 AL138880.2-201ENST00000616214 239 ntBASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXR1Q6PIV2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.328-201ENST00000365208 113 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.549-201ENST00000384657 102 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.558-201ENST00000384685 113 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 MIR184-201ENST00000384962 84 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 AC021739.1-201ENST00000559631 174 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 AL513302.2-201ENST00000562313 1842 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 MIR3136-201ENST00000583498 78 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 AP003357.1-201ENST00000604497 148 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 RMST_8.1-201ENST00000610287 165 ntBASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXR1Q6PIV2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 RNU4-15P-201ENST00000362613 141 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.281-201ENST00000364774 94 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 RNU6-756P-201ENST00000383997 107 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 MIR518C-201ENST00000384822 101 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 RN7SKP101-201ENST00000411376 320 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 RPL21P10-201ENST00000463521 490 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 RNU6-1337P-201ENST00000516525 95 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 RNU2-44P-201ENST00000516795 194 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 AL049861.1-201ENST00000603130 150 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 AC009831.4-201ENST00000620744 325 ntBASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
FOXR1Q6PIV2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RNU6-766P-201ENST00000362478 107 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RNA5SP387-201ENST00000364226 106 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 SNORD18B-201ENST00000365659 72 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.432-201ENST00000384087 111 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RNU6-136P-201ENST00000384663 107 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 SNORA11.1-201ENST00000408133 129 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RNU2-32P-201ENST00000411193 191 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RNU6-592P-201ENST00000411333 103 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 NDUFS5P4-201ENST00000412983 318 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 AC126124.2-201ENST00000413542 321 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 NDUFB4P6-201ENST00000436819 366 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms