Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL441985.1-201ENST00000457727 251 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF20Q5VTR2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF20Q5VTR2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF20Q5VTR2 AL391903.3-201ENST00000612158 163 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 AF117829.1-206ENST00000621883 3802 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 RNU6-1010P-201ENST00000362757 107 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 RNU6-283P-201ENST00000364788 107 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 MIR147B-201ENST00000390185 80 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 RPL23AP58-201ENST00000440453 469 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 AC091179.1-201ENST00000461606 579 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 AC092991.1-201ENST00000477176 376 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 AC026402.1-201ENST00000513642 170 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 RNU2-56P-201ENST00000516826 190 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 MIR4724-201ENST00000579485 89 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 VN1R85P-201ENST00000601587 426 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 MIR6844-201ENST00000637122 62 ntBASIC4.35□□□□□ -1.71
RNF20Q5VTR2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF20Q5VTR2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 MIR548B-201ENST00000385247 97 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 SNORA48.5-201ENST00000391143 135 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 HSPE1P26-201ENST00000405341 275 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 RNU6-383P-201ENST00000410864 94 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 AL365496.1-201ENST00000426885 215 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 Z75741.1-201ENST00000446793 314 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 snoU13.14-201ENST00000459372 104 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 RPL30P14-201ENST00000482744 348 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 RNU6-579P-201ENST00000516879 102 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 SNORD19.2-201ENST00000516978 73 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 AC099778.2-201ENST00000610904 211 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 MIR6076-201ENST00000617521 113 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 AL021368.2-201ENST00000606125 5352 ntBASIC4.34□□□□□ -1.71
RNF20Q5VTR2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF20Q5VTR2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.34□□□□□ -1.72
RNF20Q5VTR2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF20Q5VTR2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.34□□□□□ -1.72
RNF20Q5VTR2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF20Q5VTR2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF20Q5VTR2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF20Q5VTR2 MIR367-201ENST00000362299 68 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 snoU2_19.1-201ENST00000362361 80 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 RNU6-1180P-201ENST00000364935 107 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 SNORA67.2-201ENST00000384300 149 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 Y_RNA.521-201ENST00000384560 114 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 RNU6-768P-201ENST00000384683 107 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 U8.12-201ENST00000384701 133 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 SNORA12-201ENST00000391162 147 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 AC002075.2-201ENST00000425207 252 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 HSPE1P21-201ENST00000438283 308 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 RPS29P2-201ENST00000479278 136 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.33□□□□□ -1.72
RNF20Q5VTR2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF20Q5VTR2 AC025754.2-201ENST00000606491 432 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 RNU6-91P-201ENST00000607774 107 ntBASIC4.33□□□□□ -1.72
RNF20Q5VTR2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF20Q5VTR2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF20Q5VTR2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RNF20Q5VTR2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 U3.8-201ENST00000363675 217 ntBASIC4.32□□□□□ -1.72
RNF20Q5VTR2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 RNU6-588P-201ENST00000410281 105 ntBASIC4.32□□□□□ -1.72
RNF20Q5VTR2 CYCSP49-201ENST00000420810 319 ntBASIC4.32□□□□□ -1.72
RNF20Q5VTR2 AL445584.1-201ENST00000431451 330 ntBASIC4.32□□□□□ -1.72
RNF20Q5VTR2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 AC002076.2-201ENST00000617362 122 ntBASIC4.32□□□□□ -1.72
RNF20Q5VTR2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF20Q5VTR2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 AC010889.1-201ENST00000566193 2666 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNY1P11-201ENST00000363759 113 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNA5SP42-201ENST00000364278 115 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNU6-1305P-201ENST00000364353 104 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 U8.7-201ENST00000364940 136 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNU6-728P-201ENST00000365375 104 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNU6-1056P-201ENST00000383996 107 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 Y_RNA.525-201ENST00000384570 113 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNU6-1228P-201ENST00000391014 107 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 AL714022.1-201ENST00000439897 151 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms