Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.51□□□□□ -2.17
SF3A2Q15428 CYP2C61P-201ENST00000604072 290 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 DISC2.1-201ENST00000612827 205 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AC022709.1-201ENST00000615967 87 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.51□□□□□ -2.17
SF3A2Q15428 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.51□□□□□ -2.17
SF3A2Q15428 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SF3A2Q15428 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SF3A2Q15428 MTND4P14-201ENST00000435799 1354 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SF3A2Q15428 Y_RNA.99-201ENST00000363138 105 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 AL606923.1-201ENST00000406616 190 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 RNU6-293P-201ENST00000411259 106 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.5□□□□□ -2.17
SF3A2Q15428 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.5□□□□□ -2.17
SF3A2Q15428 SNRPEP10-201ENST00000420249 274 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 CBX3P6-201ENST00000430257 527 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 AL031274.1-201ENST00000450334 232 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.5□□□□□ -2.17
SF3A2Q15428 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 RNU7-180P-201ENST00000459240 63 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 RPS29P25-201ENST00000481709 171 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 MIR449C-201ENST00000516047 92 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 SNORD60.2-201ENST00000516883 86 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.5□□□□□ -2.17
SF3A2Q15428 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
SF3A2Q15428 RMST_3.1-201ENST00000611651 109 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 U1.36-201ENST00000620684 176 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 MIR3662-201ENST00000637030 95 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 AC024614.3-201ENST00000637860 256 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 U4.7-201ENST00000638126 106 ntBASIC1.5□□□□□ -2.17
SF3A2Q15428 RNU6-105P-201ENST00000363909 104 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 RNU4-20P-201ENST00000365601 151 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.49□□□□□ -2.17
SF3A2Q15428 RNU6-38P-201ENST00000384085 107 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 RNU6-1222P-201ENST00000384615 107 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SF3A2Q15428 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 AL590556.1-201ENST00000423231 483 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 AC243964.1-201ENST00000441814 261 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 RPS4XP11-201ENST00000446897 772 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 MTND3P16-201ENST00000452205 344 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 RNU6-333P-201ENST00000459117 107 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.49□□□□□ -2.17
SF3A2Q15428 RNU6-377P-201ENST00000515965 102 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 RNU6-1038P-201ENST00000516516 104 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 AL137161.1-201ENST00000532231 390 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.49□□□□□ -2.17
SF3A2Q15428 AC103996.1-201ENST00000555468 102 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 MIR4424-201ENST00000585257 86 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 AC010525.2-201ENST00000590920 195 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 MIR6078-201ENST00000611069 100 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SF3A2Q15428 uc_338.34-201ENST00000617467 174 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.49□□□□□ -2.17
SF3A2Q15428 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SF3A2Q15428 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
SF3A2Q15428 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SF3A2Q15428 RNU6-23P-201ENST00000363283 107 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 RNU6-336P-201ENST00000364891 107 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 RNU4-66P-201ENST00000365199 138 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SF3A2Q15428 SNORA12-201ENST00000391162 147 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 VN1R36P-201ENST00000414936 291 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.48□□□□□ -2.17
SF3A2Q15428 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.48□□□□□ -2.17
SF3A2Q15428 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.48□□□□□ -2.17
SF3A2Q15428 RPL31P58-201ENST00000469001 379 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 CCDC34P1-201ENST00000507441 517 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.48□□□□□ -2.17
SF3A2Q15428 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 RNVU1-2-201ENST00000516326 135 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 SNORA25.17-201ENST00000517184 124 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
SF3A2Q15428 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SF3A2Q15428 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.48□□□□□ -2.17
SF3A2Q15428 MTND4P7-201ENST00000523876 130 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 AC022418.1-201ENST00000624118 445 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 AL133216.2-202ENST00000634512 349 ntBASIC1.48□□□□□ -2.17
SF3A2Q15428 RNU6-1285P-201ENST00000363480 105 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 RNU6-266P-201ENST00000364225 107 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 Y_RNA.231-201ENST00000364358 102 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 RNU6-827P-201ENST00000365553 106 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SF3A2Q15428 Y_RNA.390-201ENST00000383932 102 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 RNU6-434P-201ENST00000384376 107 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 MIR514A2-201ENST00000385131 88 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 MIR514A3-201ENST00000385132 88 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SF3A2Q15428 RPL30P16-201ENST00000419341 429 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.47□□□□□ -2.17
SF3A2Q15428 AL121601.2-201ENST00000438019 707 ntBASIC1.47□□□□□ -2.17
SF3A2Q15428 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.47□□□□□ -2.17
SF3A2Q15428 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.47□□□□□ -2.17
SF3A2Q15428 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.47□□□□□ -2.17
SF3A2Q15428 MTCYBP18-201ENST00000501056 747 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms