Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
RAE1P78406 RNU6-463P-201ENST00000384340 107 ntBASIC2.59□□□□□ -1.99
RAE1P78406 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
RAE1P78406 MIR549A-201ENST00000385268 96 ntBASIC2.59□□□□□ -1.99
RAE1P78406 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RAE1P78406 RNU6-1109P-201ENST00000391187 107 ntBASIC2.59□□□□□ -1.99
RAE1P78406 MRPL35P1-201ENST00000404272 572 ntBASIC2.59□□□□□ -1.99
RAE1P78406 SNORD12B-201ENST00000410433 91 ntBASIC2.59□□□□□ -1.99
RAE1P78406 RNU6-130P-201ENST00000411112 103 ntBASIC2.59□□□□□ -1.99
RAE1P78406 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.59□□□□□ -1.99
RAE1P78406 AC007395.1-201ENST00000451333 677 ntBASIC2.59□□□□□ -1.99
RAE1P78406 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
RAE1P78406 SNORA25.14-201ENST00000516481 132 ntBASIC2.59□□□□□ -1.99
RAE1P78406 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.59□□□□□ -1.99
RAE1P78406 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
RAE1P78406 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.59□□□□□ -1.99
RAE1P78406 AC093732.2-201ENST00000607950 274 ntBASIC2.59□□□□□ -1.99
RAE1P78406 AC010999.1-201ENST00000611856 324 ntBASIC2.59□□□□□ -1.99
RAE1P78406 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
RAE1P78406 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
RAE1P78406 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.58□□□□□ -2
RAE1P78406 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RAE1P78406 RNU1-62P-201ENST00000362599 164 ntBASIC2.58□□□□□ -2
RAE1P78406 Y_RNA.47-201ENST00000362697 108 ntBASIC2.58□□□□□ -2
RAE1P78406 RNU6-461P-201ENST00000364195 107 ntBASIC2.58□□□□□ -2
RAE1P78406 SNORA70.4-201ENST00000365509 134 ntBASIC2.58□□□□□ -2
RAE1P78406 RNU6-793P-201ENST00000384233 104 ntBASIC2.58□□□□□ -2
RAE1P78406 RNU6-1145P-201ENST00000384246 107 ntBASIC2.58□□□□□ -2
RAE1P78406 RNU6-196P-201ENST00000384315 107 ntBASIC2.58□□□□□ -2
RAE1P78406 SNORA12-201ENST00000391162 147 ntBASIC2.58□□□□□ -2
RAE1P78406 AL138827.1-201ENST00000402666 306 ntBASIC2.58□□□□□ -2
RAE1P78406 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.58□□□□□ -2
RAE1P78406 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
RAE1P78406 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.58□□□□□ -2
RAE1P78406 Y_RNA.683-201ENST00000516508 93 ntBASIC2.58□□□□□ -2
RAE1P78406 SNORA40.15-201ENST00000516884 107 ntBASIC2.58□□□□□ -2
RAE1P78406 RNU6-897P-201ENST00000517135 105 ntBASIC2.58□□□□□ -2
RAE1P78406 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.58□□□□□ -2
RAE1P78406 DEFB131C-201ENST00000528817 165 ntBASIC2.58□□□□□ -2
RAE1P78406 RPL17P51-201ENST00000605218 238 ntBASIC2.58□□□□□ -2
RAE1P78406 TCL6_2.1-201ENST00000615162 119 ntBASIC2.58□□□□□ -2
RAE1P78406 AC240442.1-201ENST00000616055 283 ntBASIC2.58□□□□□ -2
RAE1P78406 7SK.10-201ENST00000621414 298 ntBASIC2.58□□□□□ -2
RAE1P78406 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.58□□□□□ -2
RAE1P78406 AL161431.1-201ENST00000618966 4205 ntBASIC2.57□□□□□ -2
RAE1P78406 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.57□□□□□ -2
RAE1P78406 Y_RNA.179-201ENST00000363844 90 ntBASIC2.57□□□□□ -2
RAE1P78406 Y_RNA.183-201ENST00000363882 113 ntBASIC2.57□□□□□ -2
RAE1P78406 Y_RNA.214-201ENST00000364201 112 ntBASIC2.57□□□□□ -2
RAE1P78406 SET-203ENST00000372688 801 ntTSL 2 BASIC2.57□□□□□ -2
RAE1P78406 Y_RNA.439-201ENST00000384119 94 ntBASIC2.57□□□□□ -2
RAE1P78406 MIR568-201ENST00000385036 95 ntBASIC2.57□□□□□ -2
RAE1P78406 MIR1302-3-201ENST00000408128 138 ntBASIC2.57□□□□□ -2
RAE1P78406 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.57□□□□□ -2
RAE1P78406 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.57□□□□□ -2
RAE1P78406 AC027124.2-201ENST00000428249 105 ntBASIC2.57□□□□□ -2
RAE1P78406 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.57□□□□□ -2
RAE1P78406 AL731563.1-201ENST00000442202 214 ntBASIC2.57□□□□□ -2
RAE1P78406 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.57□□□□□ -2
RAE1P78406 RNU6-1143P-201ENST00000516125 104 ntBASIC2.57□□□□□ -2
RAE1P78406 RNU6-397P-201ENST00000516226 104 ntBASIC2.57□□□□□ -2
RAE1P78406 RNU6-586P-201ENST00000517265 104 ntBASIC2.57□□□□□ -2
RAE1P78406 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.57□□□□□ -2
RAE1P78406 CYCSP23-201ENST00000519781 313 ntBASIC2.57□□□□□ -2
RAE1P78406 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.57□□□□□ -2
RAE1P78406 AC018630.3-201ENST00000542637 96 ntBASIC2.57□□□□□ -2
RAE1P78406 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
RAE1P78406 MIR4659A-201ENST00000580269 81 ntBASIC2.57□□□□□ -2
RAE1P78406 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
RAE1P78406 Y_RNA.772-201ENST00000606692 102 ntBASIC2.57□□□□□ -2
RAE1P78406 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.57□□□□□ -2
RAE1P78406 AC130454.1-201ENST00000622948 401 ntBASIC2.57□□□□□ -2
RAE1P78406 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
RAE1P78406 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAE1P78406 SNORA18.2-201ENST00000383865 132 ntBASIC2.56□□□□□ -2
RAE1P78406 Y_RNA.597-201ENST00000410463 100 ntBASIC2.56□□□□□ -2
RAE1P78406 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
RAE1P78406 ELOCP20-201ENST00000422460 345 ntBASIC2.56□□□□□ -2
RAE1P78406 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.56□□□□□ -2
RAE1P78406 AC009237.7-201ENST00000447357 229 ntBASIC2.56□□□□□ -2
RAE1P78406 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.56□□□□□ -2
RAE1P78406 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.56□□□□□ -2
RAE1P78406 AC091179.3-201ENST00000474761 144 ntBASIC2.56□□□□□ -2
RAE1P78406 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.56□□□□□ -2
RAE1P78406 RNU6-344P-201ENST00000516635 111 ntBASIC2.56□□□□□ -2
RAE1P78406 HSPE1P18-201ENST00000517602 280 ntBASIC2.56□□□□□ -2
RAE1P78406 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.56□□□□□ -2
RAE1P78406 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.56□□□□□ -2
RAE1P78406 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.56□□□□□ -2
RAE1P78406 AP000942.4-201ENST00000604811 241 ntBASIC2.56□□□□□ -2
RAE1P78406 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.56□□□□□ -2
RAE1P78406 AC011476.5-201ENST00000615594 130 ntBASIC2.56□□□□□ -2
RAE1P78406 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
RAE1P78406 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms