Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.51□□□□□ -1.85
CCNFP41002 AL133547.1-201ENST00000448546 220 ntBASIC3.51□□□□□ -1.85
CCNFP41002 AC091179.1-201ENST00000461606 579 ntBASIC3.51□□□□□ -1.85
CCNFP41002 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.51□□□□□ -1.85
CCNFP41002 RNU1-95P-201ENST00000516357 160 ntBASIC3.51□□□□□ -1.85
CCNFP41002 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
CCNFP41002 RNU1-128P-201ENST00000516704 160 ntBASIC3.51□□□□□ -1.85
CCNFP41002 AC026241.1-201ENST00000517873 2142 ntBASIC3.51□□□□□ -1.85
CCNFP41002 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.51□□□□□ -1.85
CCNFP41002 MIR7851-201ENST00000610611 160 ntBASIC3.51□□□□□ -1.85
CCNFP41002 AL121772.2-201ENST00000614331 297 ntBASIC3.51□□□□□ -1.85
CCNFP41002 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.51□□□□□ -1.85
CCNFP41002 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.51□□□□□ -1.85
CCNFP41002 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCNFP41002 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCNFP41002 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CCNFP41002 RNU6-1264P-201ENST00000383891 107 ntBASIC3.5□□□□□ -1.85
CCNFP41002 RNA5SP293-201ENST00000410527 113 ntBASIC3.5□□□□□ -1.85
CCNFP41002 RN7SKP51-201ENST00000410781 304 ntBASIC3.5□□□□□ -1.85
CCNFP41002 BTF3P11-201ENST00000426582 477 ntBASIC3.5□□□□□ -1.85
CCNFP41002 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNFP41002 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
CCNFP41002 CENPBD1P1-201ENST00000464061 469 ntBASIC3.5□□□□□ -1.85
CCNFP41002 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.5□□□□□ -1.85
CCNFP41002 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNFP41002 RNU6-344P-201ENST00000516635 111 ntBASIC3.5□□□□□ -1.85
CCNFP41002 SNORA70.19-201ENST00000516717 90 ntBASIC3.5□□□□□ -1.85
CCNFP41002 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNFP41002 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNFP41002 AC008739.2-201ENST00000597006 317 ntBASIC3.5□□□□□ -1.85
CCNFP41002 AC011921.3-201ENST00000605540 361 ntBASIC3.5□□□□□ -1.85
CCNFP41002 AC002064.3-201ENST00000623448 346 ntBASIC3.5□□□□□ -1.85
CCNFP41002 snoU18.1-201ENST00000629629 71 ntBASIC3.5□□□□□ -1.85
CCNFP41002 AC068205.3-201ENST00000636385 468 ntBASIC3.5□□□□□ -1.85
CCNFP41002 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CCNFP41002 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCNFP41002 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCNFP41002 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCNFP41002 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNFP41002 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNFP41002 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 RNU6-211P-201ENST00000384047 107 ntBASIC3.49□□□□□ -1.85
CCNFP41002 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNFP41002 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNFP41002 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNFP41002 MRPS36P2-201ENST00000512569 299 ntBASIC3.49□□□□□ -1.85
CCNFP41002 SCARNA11.3-201ENST00000517276 130 ntBASIC3.49□□□□□ -1.85
CCNFP41002 RPL30P11-203ENST00000598995 310 ntBASIC3.49□□□□□ -1.85
CCNFP41002 AC072026.1-201ENST00000605023 201 ntBASIC3.49□□□□□ -1.85
CCNFP41002 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNFP41002 AC110774.1-201ENST00000623567 2018 ntBASIC3.49□□□□□ -1.85
CCNFP41002 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCNFP41002 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNFP41002 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCNFP41002 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNFP41002 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCNFP41002 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNFP41002 SNORD9-201ENST00000362566 104 ntBASIC3.48□□□□□ -1.85
CCNFP41002 RNU6-525P-201ENST00000363685 104 ntBASIC3.48□□□□□ -1.85
CCNFP41002 Y_RNA.217-201ENST00000364214 105 ntBASIC3.48□□□□□ -1.85
CCNFP41002 SNORA5A-201ENST00000384111 134 ntBASIC3.48□□□□□ -1.85
CCNFP41002 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCNFP41002 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.48□□□□□ -1.85
CCNFP41002 U3.40-201ENST00000408706 208 ntBASIC3.48□□□□□ -1.85
CCNFP41002 AC093578.1-201ENST00000415219 368 ntBASIC3.48□□□□□ -1.85
CCNFP41002 CYCSP4-201ENST00000429682 331 ntBASIC3.48□□□□□ -1.85
CCNFP41002 RBMY2UP-201ENST00000453474 324 ntBASIC3.48□□□□□ -1.85
CCNFP41002 SNORD2.1-201ENST00000458762 69 ntBASIC3.48□□□□□ -1.85
CCNFP41002 Y_RNA.641-201ENST00000459414 105 ntBASIC3.48□□□□□ -1.85
CCNFP41002 AC140059.1-201ENST00000489238 361 ntBASIC3.48□□□□□ -1.85
CCNFP41002 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.48□□□□□ -1.85
CCNFP41002 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.48□□□□□ -1.85
CCNFP41002 Y_RNA.662-201ENST00000516028 97 ntBASIC3.48□□□□□ -1.85
CCNFP41002 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNFP41002 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNFP41002 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNFP41002 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNFP41002 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNFP41002 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCNFP41002 AP003122.5-201ENST00000527668 3766 ntBASIC3.48□□□□□ -1.85
CCNFP41002 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNFP41002 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNFP41002 RNU6-454P-201ENST00000364292 107 ntBASIC3.47□□□□□ -1.85
CCNFP41002 Y_RNA.262-201ENST00000364641 102 ntBASIC3.47□□□□□ -1.85
CCNFP41002 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.47□□□□□ -1.85
CCNFP41002 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
CCNFP41002 Y_RNA.464-201ENST00000384282 110 ntBASIC3.47□□□□□ -1.85
CCNFP41002 MIR7-3-201ENST00000384898 110 ntBASIC3.47□□□□□ -1.85
CCNFP41002 RNU6-1248P-201ENST00000391096 64 ntBASIC3.47□□□□□ -1.85
CCNFP41002 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.47□□□□□ -1.85
CCNFP41002 AC092185.1-201ENST00000491371 97 ntBASIC3.47□□□□□ -1.85
CCNFP41002 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNFP41002 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCNFP41002 RNA5SP112-201ENST00000515937 99 ntBASIC3.47□□□□□ -1.85
CCNFP41002 RNU6-1278P-201ENST00000516130 107 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms