Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RN7SKP282-201ENST00000516824 299 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.7□□□□□ -1.98
EPHA3P29320 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.7□□□□□ -1.98
EPHA3P29320 DEFB131C-201ENST00000528817 165 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.7□□□□□ -1.98
EPHA3P29320 AC023824.2-201ENST00000566185 400 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 MIR4659A-201ENST00000580269 81 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.7□□□□□ -1.98
EPHA3P29320 PRR13P7-201ENST00000605538 430 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 AC069294.1-201ENST00000608397 350 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 AC240442.1-201ENST00000616055 283 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.7□□□□□ -1.98
EPHA3P29320 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
EPHA3P29320 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
EPHA3P29320 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 RNU6-525P-201ENST00000363685 104 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 RNU6-806P-201ENST00000365147 105 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.69□□□□□ -1.98
EPHA3P29320 SNORA18.2-201ENST00000383865 132 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 RNU6-196P-201ENST00000384315 107 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 U6atac.2-201ENST00000408644 118 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 AL513477.1-202ENST00000417061 214 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 ARL5AP4-201ENST00000430731 512 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 DYNLT3P2-201ENST00000442517 295 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 FCF1P4-201ENST00000448326 183 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 AC067942.3-201ENST00000512025 362 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 RN7SKP49-201ENST00000516675 260 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 SNORA40.15-201ENST00000516884 107 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 SNORA31.26-201ENST00000517250 137 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 AC004486.1-201ENST00000546846 233 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 MZT1P2-201ENST00000604387 248 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 YPEL5P2-201ENST00000605553 359 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 AC010999.1-201ENST00000611856 324 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 7SK.10-201ENST00000621414 298 ntBASIC2.69□□□□□ -1.98
EPHA3P29320 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.69□□□□□ -1.98
EPHA3P29320 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
EPHA3P29320 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
EPHA3P29320 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
EPHA3P29320 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
EPHA3P29320 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.68□□□□□ -1.98
EPHA3P29320 RNU6-727P-201ENST00000363592 107 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 RNU6-944P-201ENST00000364023 107 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 RNU6-1145P-201ENST00000384246 107 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 RNU6-463P-201ENST00000384340 107 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 MIR29B2-201ENST00000385055 81 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AL079342.1-201ENST00000401460 267 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.68□□□□□ -1.98
EPHA3P29320 AC004386.2-201ENST00000441858 148 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.68□□□□□ -1.98
EPHA3P29320 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 MIR449C-201ENST00000516047 92 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 RN7SKP57-201ENST00000517248 293 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.68□□□□□ -1.98
EPHA3P29320 AP002404.1-201ENST00000532005 451 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.68□□□□□ -1.98
EPHA3P29320 MIR4503-201ENST00000582187 83 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 SNRPGP20-201ENST00000604477 205 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AL357075.2-201ENST00000614906 189 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AC005562.2-201ENST00000618264 111 ntBASIC2.68□□□□□ -1.98
EPHA3P29320 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.68□□□□□ -1.98
EPHA3P29320 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
EPHA3P29320 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
EPHA3P29320 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.68□□□□□ -1.98
EPHA3P29320 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.67□□□□□ -1.98
EPHA3P29320 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
EPHA3P29320 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
EPHA3P29320 Y_RNA.64-201ENST00000362845 102 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 Y_RNA.105-201ENST00000363182 111 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 Y_RNA.179-201ENST00000363844 90 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 RNU6-770P-201ENST00000363929 105 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 Y_RNA.222-201ENST00000364264 102 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 SNORD32B-201ENST00000364460 84 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 RNU6-245P-201ENST00000384020 107 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 Y_RNA.439-201ENST00000384119 94 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 MIR320B2-201ENST00000408479 138 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 AC004866.1-201ENST00000411748 78 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.67□□□□□ -1.98
EPHA3P29320 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.67□□□□□ -1.98
EPHA3P29320 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.67□□□□□ -1.98
EPHA3P29320 AC091179.3-201ENST00000474761 144 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.67□□□□□ -1.98
EPHA3P29320 RNU6-586P-201ENST00000517265 104 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 RRN3P3-201ENST00000549207 578 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
EPHA3P29320 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
EPHA3P29320 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.67□□□□□ -1.98
EPHA3P29320 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.67□□□□□ -1.98
EPHA3P29320 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
EPHA3P29320 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
EPHA3P29320 MTND5P35-201ENST00000557537 1720 ntBASIC2.66□□□□□ -1.98
EPHA3P29320 Y_RNA.19-201ENST00000362462 99 ntBASIC2.66□□□□□ -1.98
EPHA3P29320 Y_RNA.143-201ENST00000363520 106 ntBASIC2.66□□□□□ -1.98
EPHA3P29320 RNU6-793P-201ENST00000384233 104 ntBASIC2.66□□□□□ -1.98
EPHA3P29320 RNU6-611P-201ENST00000384276 104 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms