Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 Y_RNA.60-201ENST00000362831 98 ntBASIC3.11□□□□□ -1.91
XPAP23025 RNU6-280P-201ENST00000364145 104 ntBASIC3.11□□□□□ -1.91
XPAP23025 Y_RNA.237-201ENST00000364439 102 ntBASIC3.11□□□□□ -1.91
XPAP23025 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
XPAP23025 Y_RNA.562-201ENST00000384695 113 ntBASIC3.11□□□□□ -1.91
XPAP23025 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
XPAP23025 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
XPAP23025 RNA5SP293-201ENST00000410527 113 ntBASIC3.11□□□□□ -1.91
XPAP23025 AC097463.2-201ENST00000421074 142 ntBASIC3.11□□□□□ -1.91
XPAP23025 EIF4EP4-201ENST00000424916 578 ntBASIC3.11□□□□□ -1.91
XPAP23025 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
XPAP23025 SNORA40.9-201ENST00000515895 93 ntBASIC3.11□□□□□ -1.91
XPAP23025 Y_RNA.673-201ENST00000516306 88 ntBASIC3.11□□□□□ -1.91
XPAP23025 RNU6-794P-201ENST00000517261 64 ntBASIC3.11□□□□□ -1.91
XPAP23025 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
XPAP23025 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
XPAP23025 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
XPAP23025 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.11□□□□□ -1.91
XPAP23025 MIR3616-201ENST00000584070 92 ntBASIC3.11□□□□□ -1.91
XPAP23025 AC010900.2-201ENST00000604508 210 ntBASIC3.11□□□□□ -1.91
XPAP23025 AC005000.2-201ENST00000605468 310 ntBASIC3.11□□□□□ -1.91
XPAP23025 AC078938.1-201ENST00000620993 318 ntBASIC3.11□□□□□ -1.91
XPAP23025 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
XPAP23025 AL359854.1-201ENST00000614203 1594 ntBASIC3.11□□□□□ -1.91
XPAP23025 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
XPAP23025 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
XPAP23025 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
XPAP23025 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
XPAP23025 Y_RNA.286-201ENST00000364813 102 ntBASIC3.1□□□□□ -1.91
XPAP23025 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
XPAP23025 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
XPAP23025 SNORA12-201ENST00000391162 147 ntBASIC3.1□□□□□ -1.91
XPAP23025 RNU4-30P-201ENST00000410245 143 ntBASIC3.1□□□□□ -1.91
XPAP23025 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
XPAP23025 AC004866.1-201ENST00000411748 78 ntBASIC3.1□□□□□ -1.91
XPAP23025 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.1□□□□□ -1.91
XPAP23025 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.1□□□□□ -1.91
XPAP23025 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.1□□□□□ -1.91
XPAP23025 RPS3P1-201ENST00000456781 192 ntBASIC3.1□□□□□ -1.91
XPAP23025 AC091179.3-201ENST00000474761 144 ntBASIC3.1□□□□□ -1.91
XPAP23025 RPS29P2-201ENST00000479278 136 ntBASIC3.1□□□□□ -1.91
XPAP23025 AC107222.1-201ENST00000510899 637 ntBASIC3.1□□□□□ -1.91
XPAP23025 AC008885.1-201ENST00000514930 301 ntBASIC3.1□□□□□ -1.91
XPAP23025 RNU6-496P-201ENST00000516145 99 ntBASIC3.1□□□□□ -1.91
XPAP23025 DEFB108E-201ENST00000524692 240 ntBASIC3.1□□□□□ -1.91
XPAP23025 DEFB131C-201ENST00000528817 165 ntBASIC3.1□□□□□ -1.91
XPAP23025 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.1□□□□□ -1.91
XPAP23025 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
XPAP23025 MIR4765-201ENST00000585007 77 ntBASIC3.1□□□□□ -1.91
XPAP23025 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.1□□□□□ -1.91
XPAP23025 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.1□□□□□ -1.91
XPAP23025 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.1□□□□□ -1.91
XPAP23025 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
XPAP23025 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
XPAP23025 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
XPAP23025 RNU6-626P-201ENST00000363354 107 ntBASIC3.09□□□□□ -1.91
XPAP23025 RNU6-727P-201ENST00000363592 107 ntBASIC3.09□□□□□ -1.91
XPAP23025 RNU6-20P-201ENST00000384106 107 ntBASIC3.09□□□□□ -1.91
XPAP23025 Y_RNA.581-201ENST00000391017 97 ntBASIC3.09□□□□□ -1.91
XPAP23025 SNORA46.1-201ENST00000391069 153 ntBASIC3.09□□□□□ -1.91
XPAP23025 AL031121.1-201ENST00000406553 254 ntBASIC3.09□□□□□ -1.91
XPAP23025 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.09□□□□□ -1.91
XPAP23025 RNA5SP492-201ENST00000411330 114 ntBASIC3.09□□□□□ -1.91
XPAP23025 AC092427.1-202ENST00000430569 476 ntBASIC3.09□□□□□ -1.91
XPAP23025 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.09□□□□□ -1.91
XPAP23025 MTND4LP30-201ENST00000454092 297 ntBASIC3.09□□□□□ -1.91
XPAP23025 HSPE1P25-201ENST00000455484 251 ntBASIC3.09□□□□□ -1.91
XPAP23025 RPL39P38-201ENST00000467018 153 ntBASIC3.09□□□□□ -1.91
XPAP23025 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.09□□□□□ -1.91
XPAP23025 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.09□□□□□ -1.91
XPAP23025 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.09□□□□□ -1.91
XPAP23025 AC055872.1-201ENST00000570978 278 ntBASIC3.09□□□□□ -1.91
XPAP23025 MIR3668-201ENST00000582138 75 ntBASIC3.09□□□□□ -1.91
XPAP23025 U6.104-201ENST00000637979 90 ntBASIC3.09□□□□□ -1.91
XPAP23025 MTND5P35-201ENST00000557537 1720 ntBASIC3.09□□□□□ -1.91
XPAP23025 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
XPAP23025 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
XPAP23025 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
XPAP23025 AL391987.6-201ENST00000305671 199 ntBASIC3.08□□□□□ -1.92
XPAP23025 Y_RNA.179-201ENST00000363844 90 ntBASIC3.08□□□□□ -1.92
XPAP23025 Y_RNA.489-201ENST00000384410 101 ntBASIC3.08□□□□□ -1.92
XPAP23025 AC096920.1-201ENST00000423991 241 ntBASIC3.08□□□□□ -1.92
XPAP23025 AC073901.1-201ENST00000462471 408 ntBASIC3.08□□□□□ -1.92
XPAP23025 RNU6-1338P-201ENST00000516328 91 ntBASIC3.08□□□□□ -1.92
XPAP23025 RN7SKP40-201ENST00000517211 242 ntBASIC3.08□□□□□ -1.92
XPAP23025 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.08□□□□□ -1.92
XPAP23025 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
XPAP23025 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
XPAP23025 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
XPAP23025 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
XPAP23025 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
XPAP23025 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XPAP23025 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.07□□□□□ -1.92
XPAP23025 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.07□□□□□ -1.92
XPAP23025 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
XPAP23025 AC080100.1-201ENST00000624239 5356 ntBASIC3.07□□□□□ -1.92
XPAP23025 AC010329.5-201ENST00000623497 2174 ntBASIC3.07□□□□□ -1.92
XPAP23025 MAPK10-266ENST00000641066 6555 ntBASIC3.07□□□□□ -1.92
XPAP23025 SNORD63-201ENST00000384262 68 ntBASIC3.07□□□□□ -1.92
XPAP23025 Y_RNA.595-201ENST00000410403 105 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms