Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL161912.2-201ENST00000565707 3007 ntBASIC3.23□□□□□ -1.89
ATF4P18848 UBE2WP1-201ENST00000362030 340 ntBASIC3.23□□□□□ -1.89
ATF4P18848 RNU4-80P-201ENST00000363200 141 ntBASIC3.23□□□□□ -1.89
ATF4P18848 SNORA73.2-201ENST00000364946 201 ntBASIC3.23□□□□□ -1.89
ATF4P18848 Y_RNA.332-201ENST00000365271 113 ntBASIC3.23□□□□□ -1.89
ATF4P18848 RNA5SP366-201ENST00000365454 123 ntBASIC3.23□□□□□ -1.89
ATF4P18848 RNU6-338P-201ENST00000383888 105 ntBASIC3.23□□□□□ -1.89
ATF4P18848 RPS26P8-201ENST00000393490 348 ntBASIC3.23□□□□□ -1.89
ATF4P18848 SNORA11F-201ENST00000408237 128 ntBASIC3.23□□□□□ -1.89
ATF4P18848 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
ATF4P18848 RNU2-48P-201ENST00000410694 191 ntBASIC3.23□□□□□ -1.89
ATF4P18848 DBIP2-201ENST00000419076 262 ntBASIC3.23□□□□□ -1.89
ATF4P18848 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.23□□□□□ -1.89
ATF4P18848 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.23□□□□□ -1.89
ATF4P18848 RPL21P9-201ENST00000556149 474 ntBASIC3.23□□□□□ -1.89
ATF4P18848 MIR3145-201ENST00000580727 82 ntBASIC3.23□□□□□ -1.89
ATF4P18848 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATF4P18848 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATF4P18848 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
ATF4P18848 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
ATF4P18848 Y_RNA.275-201ENST00000364726 110 ntBASIC3.22□□□□□ -1.89
ATF4P18848 MIR592-201ENST00000384959 97 ntBASIC3.22□□□□□ -1.89
ATF4P18848 SRIP3-201ENST00000413200 219 ntBASIC3.22□□□□□ -1.89
ATF4P18848 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.22□□□□□ -1.89
ATF4P18848 AL353705.1-201ENST00000433468 480 ntBASIC3.22□□□□□ -1.89
ATF4P18848 AL357134.1-201ENST00000445848 426 ntBASIC3.22□□□□□ -1.89
ATF4P18848 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
ATF4P18848 RPL7P49-201ENST00000471402 708 ntBASIC3.22□□□□□ -1.89
ATF4P18848 AC018868.1-201ENST00000491307 315 ntBASIC3.22□□□□□ -1.89
ATF4P18848 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.22□□□□□ -1.89
ATF4P18848 RNU6-191P-201ENST00000516295 94 ntBASIC3.22□□□□□ -1.89
ATF4P18848 Y_RNA.679-201ENST00000516416 91 ntBASIC3.22□□□□□ -1.89
ATF4P18848 AP003730.1-201ENST00000524605 285 ntBASIC3.22□□□□□ -1.89
ATF4P18848 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.22□□□□□ -1.89
ATF4P18848 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATF4P18848 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.22□□□□□ -1.89
ATF4P18848 AL591424.2-201ENST00000617023 128 ntBASIC3.22□□□□□ -1.89
ATF4P18848 AC073346.2-201ENST00000624724 2058 ntBASIC3.22□□□□□ -1.89
ATF4P18848 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
ATF4P18848 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATF4P18848 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.21□□□□□ -1.9
ATF4P18848 RNU6-271P-201ENST00000363858 105 ntBASIC3.21□□□□□ -1.9
ATF4P18848 SNORA38-201ENST00000363946 132 ntBASIC3.21□□□□□ -1.9
ATF4P18848 Y_RNA.539-201ENST00000384635 107 ntBASIC3.21□□□□□ -1.9
ATF4P18848 SNORA57.1-201ENST00000391227 145 ntBASIC3.21□□□□□ -1.9
ATF4P18848 SNORD58.1-201ENST00000391313 66 ntBASIC3.21□□□□□ -1.9
ATF4P18848 Y_RNA.590-201ENST00000410140 107 ntBASIC3.21□□□□□ -1.9
ATF4P18848 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.21□□□□□ -1.9
ATF4P18848 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.21□□□□□ -1.9
ATF4P18848 AC091167.1-201ENST00000492017 396 ntBASIC3.21□□□□□ -1.9
ATF4P18848 AC010598.1-201ENST00000510378 103 ntBASIC3.21□□□□□ -1.9
ATF4P18848 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.21□□□□□ -1.9
ATF4P18848 AL445567.2-201ENST00000618935 498 ntBASIC3.21□□□□□ -1.9
ATF4P18848 MIR3653-201ENST00000625572 110 ntBASIC3.21□□□□□ -1.9
ATF4P18848 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
ATF4P18848 MIR492-201ENST00000638676 116 ntBASIC3.21□□□□□ -1.9
ATF4P18848 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
ATF4P18848 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ATF4P18848 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.21□□□□□ -1.9
ATF4P18848 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATF4P18848 SNORD114-7-201ENST00000362520 77 ntBASIC3.2□□□□□ -1.9
ATF4P18848 RNU6-740P-201ENST00000364734 105 ntBASIC3.2□□□□□ -1.9
ATF4P18848 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
ATF4P18848 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
ATF4P18848 RNU2-61P-201ENST00000411069 191 ntBASIC3.2□□□□□ -1.9
ATF4P18848 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF4P18848 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF4P18848 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
ATF4P18848 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF4P18848 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.2□□□□□ -1.9
ATF4P18848 PRELID3BP1-201ENST00000457142 540 ntBASIC3.2□□□□□ -1.9
ATF4P18848 AC010531.2-201ENST00000465012 153 ntBASIC3.2□□□□□ -1.9
ATF4P18848 RPL29P14-201ENST00000495837 428 ntBASIC3.2□□□□□ -1.9
ATF4P18848 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.2□□□□□ -1.9
ATF4P18848 SNORA31.26-201ENST00000517250 137 ntBASIC3.2□□□□□ -1.9
ATF4P18848 NDUFA5P6-201ENST00000542110 379 ntBASIC3.2□□□□□ -1.9
ATF4P18848 AC007224.1-201ENST00000564410 144 ntBASIC3.2□□□□□ -1.9
ATF4P18848 MIR3939-201ENST00000582614 106 ntBASIC3.2□□□□□ -1.9
ATF4P18848 MIR3138-201ENST00000585238 82 ntBASIC3.2□□□□□ -1.9
ATF4P18848 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF4P18848 AL020997.2-201ENST00000602607 184 ntBASIC3.2□□□□□ -1.9
ATF4P18848 AC005828.6-201ENST00000606610 232 ntBASIC3.2□□□□□ -1.9
ATF4P18848 AC114781.5-201ENST00000615297 108 ntBASIC3.2□□□□□ -1.9
ATF4P18848 AC068724.3-201ENST00000625906 87 ntBASIC3.2□□□□□ -1.9
ATF4P18848 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATF4P18848 RNU6-1240P-201ENST00000365155 104 ntBASIC3.19□□□□□ -1.9
ATF4P18848 EDDM3CP-201ENST00000415977 425 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
ATF4P18848 MTCO1P44-201ENST00000441935 243 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC245102.2-201ENST00000448956 180 ntBASIC3.19□□□□□ -1.9
ATF4P18848 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
ATF4P18848 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC025647.1-201ENST00000517879 253 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC068657.1-201ENST00000520807 306 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC106785.1-201ENST00000565935 262 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC009127.3-201ENST00000570531 403 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC090115.4-201ENST00000609970 188 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC096577.2-201ENST00000611455 153 ntBASIC3.19□□□□□ -1.9
ATF4P18848 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
ATF4P18848 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms