Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SNORA31-201ENST00000362607 130 ntBASIC3.87□□□□□ -1.79
THBS1P07996 Y_RNA.52-201ENST00000362760 96 ntBASIC3.87□□□□□ -1.79
THBS1P07996 RNU6-640P-201ENST00000363693 105 ntBASIC3.87□□□□□ -1.79
THBS1P07996 Y_RNA.163-201ENST00000363702 113 ntBASIC3.87□□□□□ -1.79
THBS1P07996 SNORD74.4-201ENST00000364129 80 ntBASIC3.87□□□□□ -1.79
THBS1P07996 Y_RNA.328-201ENST00000365208 113 ntBASIC3.87□□□□□ -1.79
THBS1P07996 RNU1-57P-201ENST00000384491 166 ntBASIC3.87□□□□□ -1.79
THBS1P07996 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.87□□□□□ -1.79
THBS1P07996 SNORA40.13-201ENST00000516379 120 ntBASIC3.87□□□□□ -1.79
THBS1P07996 RNU6-113P-201ENST00000516653 101 ntBASIC3.87□□□□□ -1.79
THBS1P07996 AC025647.1-201ENST00000517879 253 ntBASIC3.87□□□□□ -1.79
THBS1P07996 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
THBS1P07996 AC007224.1-201ENST00000564410 144 ntBASIC3.87□□□□□ -1.79
THBS1P07996 AC007012.1-201ENST00000567192 175 ntBASIC3.87□□□□□ -1.79
THBS1P07996 AC114781.5-201ENST00000615297 108 ntBASIC3.87□□□□□ -1.79
THBS1P07996 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
THBS1P07996 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.87□□□□□ -1.79
THBS1P07996 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
THBS1P07996 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
THBS1P07996 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
THBS1P07996 AC068647.1-201ENST00000489539 2265 ntBASIC3.86□□□□□ -1.79
THBS1P07996 Y_RNA.111-201ENST00000363248 100 ntBASIC3.86□□□□□ -1.79
THBS1P07996 RNA5SP167-201ENST00000365461 116 ntBASIC3.86□□□□□ -1.79
THBS1P07996 SNORA51.5-201ENST00000384126 131 ntBASIC3.86□□□□□ -1.79
THBS1P07996 Y_RNA.544-201ENST00000384650 113 ntBASIC3.86□□□□□ -1.79
THBS1P07996 MIR570-201ENST00000384917 97 ntBASIC3.86□□□□□ -1.79
THBS1P07996 SNORD12C-201ENST00000386307 89 ntBASIC3.86□□□□□ -1.79
THBS1P07996 SNORA57.1-201ENST00000391227 145 ntBASIC3.86□□□□□ -1.79
THBS1P07996 AC025554.1-201ENST00000505641 188 ntBASIC3.86□□□□□ -1.79
THBS1P07996 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.86□□□□□ -1.79
THBS1P07996 RNA5SP20-201ENST00000515976 84 ntBASIC3.86□□□□□ -1.79
THBS1P07996 RNU6-970P-201ENST00000516312 107 ntBASIC3.86□□□□□ -1.79
THBS1P07996 RNA5SP49-201ENST00000516450 115 ntBASIC3.86□□□□□ -1.79
THBS1P07996 RNU5F-4P-201ENST00000516581 114 ntBASIC3.86□□□□□ -1.79
THBS1P07996 AC107934.2-201ENST00000518653 310 ntBASIC3.86□□□□□ -1.79
THBS1P07996 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.86□□□□□ -1.79
THBS1P07996 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.86□□□□□ -1.79
THBS1P07996 MIR4753-201ENST00000585119 83 ntBASIC3.86□□□□□ -1.79
THBS1P07996 AL365205.2-201ENST00000594586 68 ntBASIC3.86□□□□□ -1.79
THBS1P07996 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.86□□□□□ -1.79
THBS1P07996 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
THBS1P07996 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
THBS1P07996 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
THBS1P07996 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
THBS1P07996 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.86□□□□□ -1.79
THBS1P07996 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
THBS1P07996 AC009487.4-201ENST00000624969 3585 ntBASIC3.86□□□□□ -1.79
THBS1P07996 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
THBS1P07996 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.85□□□□□ -1.79
THBS1P07996 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.85□□□□□ -1.79
THBS1P07996 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
THBS1P07996 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.85□□□□□ -1.79
THBS1P07996 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
THBS1P07996 AL356292.1-201ENST00000283110 373 ntBASIC3.85□□□□□ -1.79
THBS1P07996 Y_RNA.49-201ENST00000362714 112 ntBASIC3.85□□□□□ -1.79
THBS1P07996 SNORA70C-201ENST00000384538 135 ntBASIC3.85□□□□□ -1.79
THBS1P07996 Y_RNA.528-201ENST00000384575 108 ntBASIC3.85□□□□□ -1.79
THBS1P07996 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
THBS1P07996 AC091167.1-201ENST00000492017 396 ntBASIC3.85□□□□□ -1.79
THBS1P07996 RNA5SP519-201ENST00000516480 119 ntBASIC3.85□□□□□ -1.79
THBS1P07996 AP003730.1-201ENST00000524605 285 ntBASIC3.85□□□□□ -1.79
THBS1P07996 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.85□□□□□ -1.79
THBS1P07996 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.85□□□□□ -1.79
THBS1P07996 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.85□□□□□ -1.79
THBS1P07996 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.85□□□□□ -1.79
THBS1P07996 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
THBS1P07996 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
THBS1P07996 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
THBS1P07996 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
THBS1P07996 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.85□□□□□ -1.79
THBS1P07996 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
THBS1P07996 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
THBS1P07996 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
THBS1P07996 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
THBS1P07996 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
THBS1P07996 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.84□□□□□ -1.79
THBS1P07996 Y_RNA.91-201ENST00000363042 107 ntBASIC3.84□□□□□ -1.79
THBS1P07996 RNA5SP366-201ENST00000365454 123 ntBASIC3.84□□□□□ -1.79
THBS1P07996 AL139095.1-201ENST00000404326 391 ntBASIC3.84□□□□□ -1.79
THBS1P07996 MIR1263-201ENST00000408324 86 ntBASIC3.84□□□□□ -1.79
THBS1P07996 MIR1283-1-201ENST00000408494 87 ntBASIC3.84□□□□□ -1.79
THBS1P07996 RNA5SP39-201ENST00000411245 120 ntBASIC3.84□□□□□ -1.79
THBS1P07996 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.84□□□□□ -1.79
THBS1P07996 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.84□□□□□ -1.79
THBS1P07996 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.84□□□□□ -1.79
THBS1P07996 RNA5SP246-201ENST00000458909 119 ntBASIC3.84□□□□□ -1.79
THBS1P07996 SNORD65B-201ENST00000459126 73 ntBASIC3.84□□□□□ -1.79
THBS1P07996 RNU7-57P-201ENST00000459540 60 ntBASIC3.84□□□□□ -1.79
THBS1P07996 AP002884.2-201ENST00000471647 395 ntBASIC3.84□□□□□ -1.79
THBS1P07996 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.84□□□□□ -1.79
THBS1P07996 CYCSP29-201ENST00000533731 318 ntBASIC3.84□□□□□ -1.79
THBS1P07996 PRELID2P1-201ENST00000552837 301 ntBASIC3.84□□□□□ -1.79
THBS1P07996 AL020997.2-201ENST00000602607 184 ntBASIC3.84□□□□□ -1.79
THBS1P07996 MIR492-201ENST00000638676 116 ntBASIC3.84□□□□□ -1.79
THBS1P07996 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
THBS1P07996 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
THBS1P07996 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
THBS1P07996 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
THBS1P07996 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
THBS1P07996 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms