Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 CYCSP23-201ENST00000519781 313 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.63□□□□□ -1.83
VAMP4O75379 AC130289.1-201ENST00000577321 73 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VAMP4O75379 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VAMP4O75379 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
VAMP4O75379 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VAMP4O75379 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VAMP4O75379 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VAMP4O75379 Y_RNA.54-201ENST00000362766 105 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 Y_RNA.65-201ENST00000362846 100 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 RNU6-626P-201ENST00000363354 107 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 RNU6-198P-201ENST00000384258 104 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 MIR181A2-201ENST00000384863 110 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 AL139156.1-201ENST00000412785 841 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.62□□□□□ -1.83
VAMP4O75379 AC019205.3-201ENST00000424573 156 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.62□□□□□ -1.83
VAMP4O75379 snoU13.6-201ENST00000458785 104 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 RPS29P12-201ENST00000460178 152 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 GZMAP1-201ENST00000503054 631 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 RN7SKP40-201ENST00000517211 242 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 AL356575.1-201ENST00000603008 283 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 AC005520.5-201ENST00000613926 164 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 U2.14-201ENST00000615943 113 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.62□□□□□ -1.83
VAMP4O75379 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.62□□□□□ -1.83
VAMP4O75379 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VAMP4O75379 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.62□□□□□ -1.83
VAMP4O75379 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
VAMP4O75379 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
VAMP4O75379 RNA5SP139-201ENST00000364340 117 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 RNU1-112P-201ENST00000364401 164 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 MIR181B1-201ENST00000385240 110 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 SNORA53-201ENST00000391141 249 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.61□□□□□ -1.83
VAMP4O75379 MTND5P15-201ENST00000434246 349 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC112220.1-201ENST00000434628 355 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AL441985.1-201ENST00000457727 251 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC107626.1-201ENST00000471084 183 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC090525.1-201ENST00000479116 478 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AIG1P1-201ENST00000503376 148 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 SNORA81.3-201ENST00000517283 198 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AP000867.2-201ENST00000532468 320 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 CYP4A27P-201ENST00000567218 190 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC105137.2-201ENST00000569073 466 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 LARP7P3-201ENST00000579888 337 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC107294.3-201ENST00000609211 526 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC010999.1-201ENST00000611856 324 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC006386.2-201ENST00000624491 75 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 AC012005.1-201ENST00000624575 75 ntBASIC3.61□□□□□ -1.83
VAMP4O75379 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VAMP4O75379 BX322639.1-202ENST00000423987 2213 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 Y_RNA.29-201ENST00000362570 113 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 Y_RNA.269-201ENST00000364685 89 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 RNU6-20P-201ENST00000384106 107 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 Y_RNA.570-201ENST00000384750 101 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 NDUFB4P4-201ENST00000404822 243 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 Y_RNA.595-201ENST00000410403 105 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.6□□□□□ -1.83
VAMP4O75379 AC096649.2-201ENST00000416186 393 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.6□□□□□ -1.83
VAMP4O75379 AC003982.1-202ENST00000469928 248 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 RNA5SP367-201ENST00000516557 118 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 SNORA31.16-201ENST00000516773 139 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 RNU2-31P-201ENST00000516954 155 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 MIR4643-201ENST00000577473 78 ntBASIC3.6□□□□□ -1.83
VAMP4O75379 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.6□□□□□ -1.83
VAMP4O75379 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.6□□□□□ -1.83
VAMP4O75379 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VAMP4O75379 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VAMP4O75379 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.59□□□□□ -1.83
VAMP4O75379 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RNU6-1010P-201ENST00000362757 107 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RNU6-873P-201ENST00000363833 107 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RNU6-961P-201ENST00000363893 105 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 Y_RNA.200-201ENST00000364018 102 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RNU6-1062P-201ENST00000383908 107 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RNU6-245P-201ENST00000384020 107 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 Y_RNA.555-201ENST00000384673 110 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 AC007395.1-201ENST00000451333 677 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 AC074133.1-201ENST00000515696 183 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 SNORA40.9-201ENST00000515895 93 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 SNORA31.26-201ENST00000517250 137 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 RRN3P3-201ENST00000549207 578 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 AC233702.2-202ENST00000562547 291 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.59□□□□□ -1.83
VAMP4O75379 AL365434.2-201ENST00000607979 234 ntBASIC3.59□□□□□ -1.83
VAMP4O75379 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VAMP4O75379 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
VAMP4O75379 AC010889.1-201ENST00000566193 2666 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAMP4O75379 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VAMP4O75379 AC092435.3-201ENST00000565538 3654 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 Y_RNA.44-201ENST00000362676 108 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 RNU6-525P-201ENST00000363685 104 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 RNU4-56P-201ENST00000364700 142 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 Y_RNA.286-201ENST00000364813 102 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms