Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 MIR549A-201ENST00000385268 96 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 RNA5SP109-201ENST00000391010 116 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 RNU6-195P-201ENST00000411352 109 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN2BO60939 SSR1P2-201ENST00000415208 787 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.62□□□□□ -2.31
SCN2BO60939 AL365184.2-201ENST00000431139 435 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN2BO60939 AC245047.7-201ENST00000440265 293 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC004854.1-201ENST00000440356 349 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 RPS29P1-201ENST00000465274 159 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC010486.2-201ENST00000505572 483 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.62□□□□□ -2.31
SCN2BO60939 RNU6-322P-201ENST00000516010 103 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN2BO60939 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN2BO60939 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 MIR4999-201ENST00000585029 91 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.62□□□□□ -2.31
SCN2BO60939 AC022432.1-201ENST00000595739 310 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 GHRLOS.1-201ENST00000610995 70 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 AC009541.1-201ENST00000438279 2662 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 SNORD113-6-201ENST00000363345 75 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 RNU5F-7P-201ENST00000363696 115 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 RNU6-169P-201ENST00000365336 107 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 SNORA80D-201ENST00000384488 135 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 RNU6-417P-201ENST00000384712 107 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 RNU6-550P-201ENST00000391057 101 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN2BO60939 MTCO2P34-201ENST00000421994 607 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN2BO60939 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN2BO60939 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN2BO60939 AC105758.1-201ENST00000506038 399 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 LRRC34P2-201ENST00000514850 553 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 RNU6-922P-201ENST00000516753 99 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN2BO60939 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.61□□□□□ -2.31
SCN2BO60939 AC026470.2-201ENST00000561492 181 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 AL391840.1-201ENST00000571144 367 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 MIR4452-201ENST00000583004 71 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 MIR548AB-201ENST00000584917 84 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 AC005771.1-201ENST00000585581 349 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN2BO60939 AP001836.1-201ENST00000604675 523 ntBASIC0.61□□□□□ -2.31
SCN2BO60939 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN2BO60939 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SCN2BO60939 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 AL356583.2-201ENST00000426536 280 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 ZNF114P1-201ENST00000453500 292 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 AC079382.1-201ENST00000493346 557 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 RPL39P5-202ENST00000512505 151 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN2BO60939 RNU1-142P-201ENST00000516682 145 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN2BO60939 AC103996.1-201ENST00000555468 102 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 AC006001.4-201ENST00000622243 395 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 SNORD3E-202ENST00000627253 216 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 MTND4P9-201ENST00000507819 1346 ntBASIC0.6□□□□□ -2.31
SCN2BO60939 RNA5SP361-201ENST00000362686 118 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 RNU6-827P-201ENST00000365553 106 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 RNU6-975P-201ENST00000384296 105 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN2BO60939 AC010154.1-201ENST00000425857 269 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AL606517.2-201ENST00000442855 241 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 MTCO2P6-201ENST00000463134 685 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC092991.1-201ENST00000477176 376 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.59□□□□□ -2.31
SCN2BO60939 FABP5P5-201ENST00000515537 406 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 RNU6-947P-201ENST00000516264 106 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 RNU2-46P-201ENST00000517038 113 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SCN2BO60939 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN2BO60939 AC016256.1-201ENST00000547971 354 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 MTND4P33-201ENST00000556706 766 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 TPRKBP2-201ENST00000565969 475 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC146944.4-201ENST00000602697 718 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 Z99497.2-201ENST00000603634 310 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC104458.1-201ENST00000608243 463 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AP000240.1-201ENST00000609910 452 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC104465.1-201ENST00000611365 139 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC091304.9-201ENST00000612091 226 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC005562.2-201ENST00000618264 111 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AL513423.1-201ENST00000621695 132 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 AC011155.2-201ENST00000623202 216 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 SNORA43.4-201ENST00000629559 138 ntBASIC0.59□□□□□ -2.31
SCN2BO60939 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SCN2BO60939 Y_RNA.367-201ENST00000365544 101 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
SCN2BO60939 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.58□□□□□ -2.32
SCN2BO60939 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN2BO60939 AC016717.1-201ENST00000448918 286 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 RPL39P39-201ENST00000455840 151 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 AC090572.1-201ENST00000519251 160 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 APOOP3-201ENST00000536787 586 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms