Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.92□□□□□ -1.94
CTNND1O60716 MRPS18CP6-201ENST00000423587 223 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 AC018865.2-201ENST00000423631 129 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.92□□□□□ -1.94
CTNND1O60716 AL137792.2-201ENST00000443484 235 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 snoU13.15-201ENST00000459407 104 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 AC105758.1-201ENST00000506038 399 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.92□□□□□ -1.94
CTNND1O60716 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CTNND1O60716 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.92□□□□□ -1.94
CTNND1O60716 AL356575.1-201ENST00000603008 283 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 AC135776.4-201ENST00000624300 1904 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.91□□□□□ -1.94
CTNND1O60716 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CTNND1O60716 BX322639.1-202ENST00000423987 2213 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 Y_RNA.314-201ENST00000365114 102 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 Y_RNA.445-201ENST00000384168 102 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CTNND1O60716 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.91□□□□□ -1.94
CTNND1O60716 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.91□□□□□ -1.94
CTNND1O60716 AC007677.1-201ENST00000445757 515 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 AL035666.1-201ENST00000446195 348 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 AC132942.1-201ENST00000486753 483 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.91□□□□□ -1.94
CTNND1O60716 Y_RNA.661-201ENST00000516003 99 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 AC144568.1-201ENST00000520139 137 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 CBX3P7-201ENST00000532876 502 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 AC027288.2-201ENST00000553028 243 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.91□□□□□ -1.94
CTNND1O60716 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.91□□□□□ -1.94
CTNND1O60716 AC016727.2-201ENST00000603988 621 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 RPL17P51-201ENST00000605218 238 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 AC091925.1-201ENST00000623204 462 ntBASIC2.91□□□□□ -1.94
CTNND1O60716 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.91□□□□□ -1.94
CTNND1O60716 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.91□□□□□ -1.94
CTNND1O60716 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.9□□□□□ -1.94
CTNND1O60716 Z82209.1-201ENST00000422141 2135 ntBASIC2.9□□□□□ -1.94
CTNND1O60716 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.94
CTNND1O60716 RNU6-874P-201ENST00000362390 105 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 Y_RNA.138-201ENST00000363462 102 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNA5SP456-201ENST00000364002 114 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU6-26P-201ENST00000383985 107 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU6-546P-201ENST00000383991 107 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU6-474P-201ENST00000384243 107 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU6-159P-201ENST00000391080 106 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 MIR320B2-201ENST00000408479 138 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU2-32P-201ENST00000411193 191 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 AL356320.1-201ENST00000429616 163 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 RNU7-87P-201ENST00000459343 62 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 Y_RNA.631-201ENST00000459607 101 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNND1O60716 AC234781.5-201ENST00000508429 271 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNND1O60716 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNND1O60716 SNRPGP20-201ENST00000604477 205 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNND1O60716 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 MTND5P16-201ENST00000460269 1703 ntBASIC2.9□□□□□ -1.95
CTNND1O60716 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.9□□□□□ -1.95
CTNND1O60716 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNND1O60716 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNND1O60716 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.89□□□□□ -1.95
CTNND1O60716 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.89□□□□□ -1.95
CTNND1O60716 RNU1-23P-201ENST00000363361 144 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 SNORA69.1-201ENST00000390904 137 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTNND1O60716 RN7SKP223-201ENST00000410582 62 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 AL354751.2-201ENST00000415471 210 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 AC005534.2-201ENST00000431047 433 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNND1O60716 AP000870.1-201ENST00000472927 406 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 AC090096.1-201ENST00000489168 390 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 RNU6-1153P-201ENST00000516760 105 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.89□□□□□ -1.95
CTNND1O60716 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CTNND1O60716 AC026470.2-201ENST00000561492 181 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 AC090517.1-201ENST00000569307 266 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 MIR4648-201ENST00000580107 72 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CTNND1O60716 AC087588.2-201ENST00000617667 426 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 U4atac.1-201ENST00000618345 95 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTNND1O60716 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CTNND1O60716 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.89□□□□□ -1.95
CTNND1O60716 ZNF204P-201ENST00000416749 2397 ntBASIC2.89□□□□□ -1.95
CTNND1O60716 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.89□□□□□ -1.95
CTNND1O60716 RNU1-115P-201ENST00000365329 160 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 RNU6-1227P-201ENST00000383981 107 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 MIR504-201ENST00000385065 83 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 Y_RNA.605-201ENST00000410577 105 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 AC027124.2-201ENST00000428249 105 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 USP9YP16-201ENST00000430287 407 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 USP9YP23-201ENST00000455085 407 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 RNU7-26P-201ENST00000458980 63 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 AC023442.1-201ENST00000531247 422 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 AC022616.8-201ENST00000533569 253 ntBASIC2.88□□□□□ -1.95
CTNND1O60716 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms