Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SSNA1O43805 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 MIR508-201ENST00000384857 115 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 MIR122-201ENST00000385044 85 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 AL034345.1-201ENST00000407768 123 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 RNU2-69P-201ENST00000516061 100 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
SSNA1O43805 AL158050.2-201ENST00000605336 568 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 AL359075.3-201ENST00000613288 217 ntBASIC0.42□□□□□ -2.34
SSNA1O43805 RNU6-199P-201ENST00000362954 107 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 RNU6-266P-201ENST00000364225 107 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 RNU6-1305P-201ENST00000364353 104 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 RNU6-393P-201ENST00000384475 107 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 MRPL42P3-201ENST00000401492 326 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 SNORA11.2-201ENST00000408318 127 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AL356583.2-201ENST00000426536 280 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.41□□□□□ -2.34
SSNA1O43805 AC009237.7-201ENST00000447357 229 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 USP9YP12-201ENST00000450481 570 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 RNU7-90P-201ENST00000459216 62 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 snoU13.15-201ENST00000459407 104 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SSNA1O43805 RNU6-917P-201ENST00000516294 104 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.41□□□□□ -2.34
SSNA1O43805 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AC090049.2-201ENST00000550377 109 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.41□□□□□ -2.34
SSNA1O43805 AC026470.2-201ENST00000561492 181 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AL133173.2-201ENST00000614270 90 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
SSNA1O43805 AC009541.1-201ENST00000438279 2662 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 SNORD116-13-201ENST00000384408 92 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 SNORA16.2-201ENST00000390991 127 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 RNA5SP213-201ENST00000391031 106 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 AL451046.2-201ENST00000403074 277 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.4□□□□□ -2.35
SSNA1O43805 CDK8P2-201ENST00000415020 547 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 MTND3P17-201ENST00000416968 344 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.4□□□□□ -2.35
SSNA1O43805 AL596276.1-201ENST00000434465 418 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 AL512286.1-201ENST00000439244 400 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.4□□□□□ -2.35
SSNA1O43805 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.4□□□□□ -2.35
SSNA1O43805 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.4□□□□□ -2.35
SSNA1O43805 MTCO3P8-201ENST00000453691 755 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 RPL39P39-201ENST00000455840 151 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 RNU7-57P-201ENST00000459540 60 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 AL049830.1-201ENST00000468034 425 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 RNU6-410P-201ENST00000517006 107 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.4□□□□□ -2.35
SSNA1O43805 AC007834.2-201ENST00000536310 343 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.4□□□□□ -2.35
SSNA1O43805 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.4□□□□□ -2.35
SSNA1O43805 MIR4775-201ENST00000581168 75 ntBASIC0.4□□□□□ -2.35
SSNA1O43805 ELL2P3-201ENST00000457883 1602 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 RNU5E-5P-201ENST00000365379 116 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 RNU4-48P-201ENST00000365559 182 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SSNA1O43805 MIR10B-201ENST00000385011 110 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 SNORD70.1-201ENST00000391007 85 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SSNA1O43805 RNU4-46P-201ENST00000410818 138 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 FABP5P4-201ENST00000437203 171 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 AL606662.1-201ENST00000445763 553 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 EPS15P1-201ENST00000448836 336 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 AC074290.1-201ENST00000448883 135 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.39□□□□□ -2.35
SSNA1O43805 AC113410.1-201ENST00000505029 247 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.39□□□□□ -2.35
SSNA1O43805 RNU6-113P-201ENST00000516653 101 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 RNU2-46P-201ENST00000517038 113 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 AC022878.1-201ENST00000530684 149 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.39□□□□□ -2.35
SSNA1O43805 AC098848.2-201ENST00000588023 330 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 RSL24D1P11-201ENST00000591045 491 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.39□□□□□ -2.35
SSNA1O43805 AC006927.3-201ENST00000638789 384 ntBASIC0.39□□□□□ -2.35
SSNA1O43805 CASC19-280ENST00000642102 1351 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 AP000568.1-201ENST00000282964 442 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RNU6-1080P-201ENST00000383982 107 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RNU6-1029P-201ENST00000384109 107 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RNU6-434P-201ENST00000384376 107 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 MIR586-201ENST00000385035 97 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 MIR454-201ENST00000390180 115 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RPL17P50-201ENST00000396131 546 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 AL355143.1-201ENST00000407101 841 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.38□□□□□ -2.35
SSNA1O43805 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.38□□□□□ -2.35
SSNA1O43805 RPS29P15-201ENST00000458329 171 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RN7SKP265-201ENST00000516448 223 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 Vault.3-201ENST00000516676 95 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RNU7-128P-201ENST00000517247 62 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 AC025647.1-201ENST00000517879 253 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 RNU6-323P-201ENST00000521915 107 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.38□□□□□ -2.35
SSNA1O43805 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.38□□□□□ -2.35
SSNA1O43805 AC018659.1-201ENST00000551083 169 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 MTND4P33-201ENST00000556706 766 ntBASIC0.38□□□□□ -2.35
SSNA1O43805 AGGF1P4-201ENST00000568249 801 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms