Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF223E7ERA6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF223E7ERA6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RNF223E7ERA6 RNU6-743P-201ENST00000364151 106 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 SNORD58A-201ENST00000383875 65 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 Y_RNA.547-201ENST00000384654 119 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 MIR23B-201ENST00000384832 97 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 MIR1253-201ENST00000408273 105 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 SNORA7.5-201ENST00000410672 110 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 AC025750.2-201ENST00000442609 450 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 RN7SL558P-201ENST00000497468 299 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 AC091544.4-201ENST00000555268 342 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 AC091979.2-201ENST00000607514 214 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 AC095038.3-201ENST00000634439 195 ntBASIC3.93□□□□□ -1.78
RNF223E7ERA6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF223E7ERA6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF223E7ERA6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF223E7ERA6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF223E7ERA6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
RNF223E7ERA6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RNF223E7ERA6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF223E7ERA6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF223E7ERA6 AC000123.3-201ENST00000624029 4975 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF223E7ERA6 RNU1-20P-201ENST00000363314 162 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 RNU6-1229P-201ENST00000364295 107 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 RNU6-1201P-201ENST00000384227 107 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 MIR522-201ENST00000385071 87 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 RNA5SP144-201ENST00000410846 116 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 AL645608.4-201ENST00000423619 154 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 RPS15AP28-201ENST00000435088 386 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 RPL23AP63-201ENST00000498752 471 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 RNU6-709P-201ENST00000517257 104 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 AL358944.1-201ENST00000528537 144 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 AC004812.1-201ENST00000540773 146 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 MIR4439-201ENST00000583746 80 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 AC078899.2-201ENST00000595282 212 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 ZYXP1-201ENST00000617638 118 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF223E7ERA6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 OR51H2P-202ENST00000641424 3046 ntBASIC3.92□□□□□ -1.78
RNF223E7ERA6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF223E7ERA6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF223E7ERA6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF223E7ERA6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF223E7ERA6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF223E7ERA6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 RNU6-633P-201ENST00000362612 103 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 RNU6-442P-201ENST00000383968 104 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 Y_RNA.430-201ENST00000384081 110 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 SNORA37-201ENST00000384504 129 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 AL512326.2-201ENST00000426359 151 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF223E7ERA6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 AP003484.1-201ENST00000530974 250 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF223E7ERA6 AC093249.4-201ENST00000564755 259 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 MIR3138-201ENST00000585238 82 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 U2.20-201ENST00000613956 192 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 AC114781.5-201ENST00000615297 108 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 U4atac.1-201ENST00000618345 95 ntBASIC3.91□□□□□ -1.78
RNF223E7ERA6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF223E7ERA6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF223E7ERA6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF223E7ERA6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF223E7ERA6 OR14L1P-202ENST00000641545 3009 ntBASIC3.9□□□□□ -1.78
RNF223E7ERA6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF223E7ERA6 AL136164.3-201ENST00000624429 3978 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 SNORA31-201ENST00000362607 130 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 RNA5SP28-201ENST00000363841 119 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 Y_RNA.299-201ENST00000364973 94 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 SNORA70C-201ENST00000384538 135 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 RNU6-1274P-201ENST00000384557 107 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 U8.15-201ENST00000390947 134 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 RN7SKP16-201ENST00000410180 299 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 RNU6-1186P-201ENST00000410429 97 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 RN7SKP200-201ENST00000410564 320 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 AL022718.1-201ENST00000412004 84 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 AP001486.1-201ENST00000463339 476 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 RN7SL303P-201ENST00000469773 251 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF223E7ERA6 RNU7-99P-201ENST00000516271 62 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 MIR2116-201ENST00000517221 80 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 MIR4712-201ENST00000583750 82 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 AC145423.2-201ENST00000610631 239 ntBASIC3.9□□□□□ -1.79
RNF223E7ERA6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RNF223E7ERA6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms