Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC026470.2-201ENST00000561492 181 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 MIR3171-201ENST00000584270 74 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC103810.6-201ENST00000606708 136 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC133104.2-201ENST00000615272 193 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AL450472.1-202ENST00000637286 180 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.89□□□□□ -2.11
SRRM4A7MD48 MTND5P10-201ENST00000603719 1809 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SRRM4A7MD48 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.88□□□□□ -2.11
SRRM4A7MD48 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SRRM4A7MD48 Y_RNA.197-201ENST00000364004 102 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 SNORD114-30-201ENST00000364448 72 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 Y_RNA.395-201ENST00000383945 109 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 RNU6-890P-201ENST00000384121 107 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 SNORA29-201ENST00000384183 140 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 MIR559-201ENST00000385188 96 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 RNU6-308P-201ENST00000390957 107 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 HMGN2P39-201ENST00000398005 273 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 RPS15AP28-201ENST00000435088 386 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 FTH1P25-201ENST00000447665 469 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AL353705.4-201ENST00000449661 238 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC097473.1-201ENST00000508142 408 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.88□□□□□ -2.11
SRRM4A7MD48 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 RNU6-1198P-201ENST00000516904 67 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC021269.2-201ENST00000532318 330 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC011494.1-201ENST00000596454 237 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AL078605.1-201ENST00000603529 500 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC005034.5-201ENST00000604219 466 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 uc_338.22-201ENST00000622722 187 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 AC012640.5-201ENST00000623897 319 ntBASIC1.88□□□□□ -2.11
SRRM4A7MD48 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SRRM4A7MD48 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 Y_RNA.31-201ENST00000362574 102 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU5B-2P-201ENST00000363036 113 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU6-234P-201ENST00000365229 104 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU6-1040P-201ENST00000383974 107 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU6-842P-201ENST00000384269 107 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 SNORD14D-201ENST00000384390 87 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 Y_RNA.510-201ENST00000384511 114 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU6-331P-201ENST00000384724 107 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU6-1093P-201ENST00000391194 107 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNA5SP465-201ENST00000391195 109 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 SNORA75.6-201ENST00000391318 127 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 USMG5P1-201ENST00000425964 177 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 AC018634.1-201ENST00000437554 401 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 AP001486.1-201ENST00000463339 476 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 AL049873.1-201ENST00000480540 376 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 SCARNA16.2-201ENST00000516520 172 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNA5SP384-201ENST00000516615 116 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 RNU6-965P-201ENST00000516721 96 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 Y_RNA.711-201ENST00000516993 102 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 SNRPGP18-201ENST00000553000 214 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 CYP2C61P-201ENST00000604072 290 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.87□□□□□ -2.11
SRRM4A7MD48 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.87□□□□□ -2.11
SRRM4A7MD48 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SRRM4A7MD48 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SRRM4A7MD48 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SRRM4A7MD48 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 Y_RNA.2-201ENST00000362330 96 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 RNU6-1115P-201ENST00000362490 106 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 Y_RNA.162-201ENST00000363683 102 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 RNU6-596P-201ENST00000365395 98 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 PMCHL1-202ENST00000423102 261 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 AL137792.2-201ENST00000443484 235 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 AL163540.1-201ENST00000485382 386 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 ANXA2P1-201ENST00000505539 926 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC234781.5-201ENST00000508429 271 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 RNU6-120P-201ENST00000516077 103 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 RNA5SP490-201ENST00000517141 136 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 RNU2-19P-201ENST00000517288 84 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.86□□□□□ -2.11
SRRM4A7MD48 PRELID2P1-201ENST00000552837 301 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 AL360085.1-201ENST00000604713 532 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 MIR3976-201ENST00000606807 139 ntBASIC1.86□□□□□ -2.11
SRRM4A7MD48 PART1_1.1-201ENST00000611761 217 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms