Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR423-201ENST00000362201 94 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.452-201ENST00000384202 108 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 SNORD12B-201ENST00000410433 91 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 RN7SKP192-201ENST00000411291 327 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 ELOCP20-201ENST00000422460 345 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 AC073901.1-201ENST00000462471 408 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 AC069294.1-201ENST00000608397 350 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 AC004832.5-201ENST00000608677 401 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 AC010999.1-201ENST00000611856 324 ntBASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC85CA6NKD9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MIR95-201ENST00000385072 81 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MIR1302-3-201ENST00000408128 138 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 RPL26P26-201ENST00000480251 434 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 SNORA25.14-201ENST00000516481 132 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 COX6CP5-201ENST00000527162 228 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 DEFB131C-201ENST00000528817 165 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MIR4659A-201ENST00000580269 81 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MIR4503-201ENST00000582187 83 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 MIR3199-1-201ENST00000582434 88 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.772-201ENST00000606692 102 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 AC005562.2-201ENST00000618264 111 ntBASIC3.45□□□□□ -1.86
CCDC85CA6NKD9 Z82209.1-201ENST00000422141 2135 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.439-201ENST00000384119 94 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.556-201ENST00000384677 113 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 MIR592-201ENST00000384959 97 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 SNORD67-201ENST00000390833 111 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 Z98742.3-201ENST00000418637 326 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.683-201ENST00000516508 93 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 RNU6-344P-201ENST00000516635 111 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 MYL12BP1-201ENST00000569826 507 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 AC078899.3-201ENST00000599065 212 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC85CA6NKD9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.140-201ENST00000363474 103 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 RNA5SP68-201ENST00000363885 119 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 RNU6-770P-201ENST00000363929 105 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 RNU6-793P-201ENST00000384233 104 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 CBX3P6-201ENST00000430257 527 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC140059.1-201ENST00000489238 361 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC074133.1-201ENST00000515696 183 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 SNORA40.15-201ENST00000516884 107 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC004817.2-201ENST00000561794 651 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC107871.2-201ENST00000612894 502 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 AC130454.1-201ENST00000622948 401 ntBASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC85CA6NKD9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.179-201ENST00000363844 90 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 RNU6-461P-201ENST00000364195 107 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 MIR489-201ENST00000384923 84 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 RPL23AP36-201ENST00000413895 458 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 IPO7P1-201ENST00000442031 636 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 AC009237.7-201ENST00000447357 229 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 AC091179.3-201ENST00000474761 144 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 AC107016.2-201ENST00000547968 190 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 AL161670.1-201ENST00000554348 137 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 AC233702.2-202ENST00000562547 291 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 MIR3186-201ENST00000577404 85 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 uc_338.25-201ENST00000613756 156 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 MIR6817-201ENST00000615588 66 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 U4.1-201ENST00000620349 87 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 MIR8062-201ENST00000621515 85 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC85CA6NKD9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 Y_RNA.518-201ENST00000384552 113 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MIR512-1-201ENST00000384913 84 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MIR7-2-201ENST00000384970 110 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MIR218-1-201ENST00000384999 110 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 Z98941.1-201ENST00000407764 100 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms