Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 SNORA31.26-201ENST00000517250 137 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AC034114.1-201ENST00000520293 285 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AC107016.2-201ENST00000547968 190 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AL355297.3-201ENST00000604082 446 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AL121655.1-201ENST00000605811 308 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU1-62P-201ENST00000362599 164 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNA5SP126-201ENST00000365092 109 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-851P-201ENST00000384565 107 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 AC004866.1-201ENST00000411748 78 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RPL32P35-201ENST00000415214 394 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 Z82209.1-201ENST00000422141 2135 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 AC009969.1-201ENST00000438726 172 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RPEP5-201ENST00000441137 268 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU7-14P-201ENST00000459331 62 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 MRPS35P2-201ENST00000508242 191 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU1-143P-201ENST00000516296 146 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-1012P-201ENST00000516606 109 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 AC104027.1-201ENST00000521887 300 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 MIR4659A-201ENST00000580269 81 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 U1.23-201ENST00000610293 146 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 RNU1-68P-201ENST00000615382 146 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 AC011476.5-201ENST00000615594 130 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 U1.39-201ENST00000621562 146 ntBASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.67□□□□□ -1.98
MBD3L4A6NDZ8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 MIR449A-201ENST00000362113 91 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.210-201ENST00000364161 110 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-1145P-201ENST00000384246 107 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 AC022616.8-201ENST00000533569 253 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RRN3P3-201ENST00000549207 578 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 AC023824.2-201ENST00000566185 400 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RAC1P9-201ENST00000604990 392 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 AL162730.1-201ENST00000605734 292 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 AC240442.1-201ENST00000616055 283 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 AC096644.4-201ENST00000563417 2912 ntBASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MBD3L4A6NDZ8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
MBD3L4A6NDZ8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-1309P-201ENST00000363305 108 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.458-201ENST00000384240 102 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 MIR561-201ENST00000385216 97 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 RN7SKP284-201ENST00000411002 343 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AC007395.1-201ENST00000451333 677 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 PCNPP5-201ENST00000452246 481 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AC010655.3-201ENST00000478818 450 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 RN7SL20P-201ENST00000488827 297 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AC067942.3-201ENST00000512025 362 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 SNORA40.9-201ENST00000515895 93 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 RNA5SP356-201ENST00000515972 94 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-344P-201ENST00000516635 111 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 SNORA40.15-201ENST00000516884 107 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AL021879.1-201ENST00000611756 288 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AL357075.2-201ENST00000614906 189 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 MIR7153-201ENST00000637758 57 ntBASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
MBD3L4A6NDZ8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.415-201ENST00000384012 112 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 RNU2-25P-201ENST00000411041 191 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 RPS27P29-201ENST00000463110 252 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 AC109329.2-201ENST00000519658 482 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 CYCSP23-201ENST00000519781 313 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms