Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AL353752.1-201ENST00000454946 260 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 RNU7-169P-201ENST00000459456 61 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 AC145146.1-201ENST00000496370 254 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 ANP32BP3-201ENST00000559213 706 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 AC040896.1-201ENST00000613819 479 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 RNU4-15P-201ENST00000362613 141 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 RNA5SP99-201ENST00000364020 114 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.319-201ENST00000365138 92 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 RNU6-1032P-201ENST00000384100 107 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 U8.10-201ENST00000384260 133 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 MIR627-201ENST00000384979 97 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 HMGB3P2-201ENST00000411913 584 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC114482.1-201ENST00000418010 247 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 USP9YP16-201ENST00000430287 407 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 USP9YP23-201ENST00000455085 407 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC080013.2-201ENST00000460866 323 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 RN7SKP43-201ENST00000516173 320 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.676-201ENST00000516393 96 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 GNAI2P1-201ENST00000541815 315 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC004486.1-201ENST00000546846 233 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 MIR3616-201ENST00000584070 92 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC006504.6-201ENST00000590142 199 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC090115.4-201ENST00000609970 188 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AC005520.5-201ENST00000613926 164 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 AL606534.2-204ENST00000635008 178 ntBASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM43BA6NCK2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 RNU6-874P-201ENST00000362390 105 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 RNY3P11-201ENST00000364153 102 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.358-201ENST00000365491 99 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 RNU6-639P-201ENST00000384074 107 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 RNU6-482P-201ENST00000391068 107 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 HSBP1P1-201ENST00000555205 166 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 AC087588.2-201ENST00000617667 426 ntBASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TRIM43BA6NCK2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 MTND5P16-201ENST00000460269 1703 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 RNU6-137P-201ENST00000363680 108 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 U3.9-201ENST00000363823 204 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 SNORA46.1-201ENST00000391069 153 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AL590004.2-201ENST00000404787 371 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 RNA5SP201-201ENST00000410316 124 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AC096644.2-201ENST00000429278 159 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 RNU4-77P-201ENST00000516692 156 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 RNA5SP54-201ENST00000516951 92 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AC006600.1-201ENST00000572529 153 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AC090617.3-201ENST00000573670 475 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 U2.1-201ENST00000618978 145 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 U4.3-201ENST00000621047 82 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 MIR4272-201ENST00000635924 64 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AC005592.1-201ENST00000566527 1640 ntBASIC2.85□□□□□ -1.95
TRIM43BA6NCK2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 RNU6-222P-201ENST00000362438 107 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 RNU6-378P-201ENST00000384324 107 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 MRPL42P3-201ENST00000401492 326 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 MIR320B2-201ENST00000408479 138 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 AL135786.1-201ENST00000415892 214 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 AL160004.2-201ENST00000432935 350 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 HMGN2P3-201ENST00000433603 273 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 HMGN2P5-201ENST00000436882 273 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 AP000870.1-201ENST00000472927 406 ntBASIC2.84□□□□□ -1.95
TRIM43BA6NCK2 RNU6-1114P-201ENST00000516022 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms