Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC012306.1-201ENST00000423267 114 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 TIMM9P3-201ENST00000428659 274 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AC016717.1-201ENST00000448918 286 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AC016550.1-201ENST00000505348 785 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 RNU4-57P-201ENST00000515980 135 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AC090049.2-201ENST00000550377 109 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AL391840.1-201ENST00000571144 367 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AC146944.4-201ENST00000602697 718 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AL031775.1-201ENST00000607014 887 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 MIR6513-201ENST00000621188 64 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 RNU1-133P-201ENST00000364867 167 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 MIR660-201ENST00000385235 97 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-440P-201ENST00000390882 105 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 SNORA16.2-201ENST00000390991 127 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-1093P-201ENST00000391194 107 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 MTCYBP36-201ENST00000404146 440 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AL355796.1-201ENST00000406706 323 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 SNORD99-201ENST00000408612 74 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 RNA5SP247-201ENST00000411181 105 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 RPL37P21-201ENST00000435890 276 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC022364.2-201ENST00000457963 554 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AL049830.1-201ENST00000468034 425 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC079382.1-201ENST00000493346 557 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC010587.1-201ENST00000505809 469 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 BNIP3P40-201ENST00000596017 556 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC013244.3-201ENST00000605614 388 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AL158211.2-201ENST00000607282 395 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC073349.3-201ENST00000617616 186 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC006001.4-201ENST00000622243 395 ntBASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV4A0A0B4J268 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-199P-201ENST00000362954 107 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-163P-201ENST00000384396 106 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-809P-201ENST00000384461 107 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 U7.7-201ENST00000459276 60 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 AC010486.2-201ENST00000505572 483 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-496P-201ENST00000516145 99 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 ZNF519P3-201ENST00000557158 1032 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 AL162424.1-201ENST00000602325 221 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 AL078603.1-201ENST00000603824 313 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 AC022217.4-201ENST00000604389 163 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 PRELID3BP2-201ENST00000605362 201 ntBASIC0.23□□□□□ -2.37
TRAV4A0A0B4J268 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 MTND4P5-201ENST00000435821 1374 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-179P-201ENST00000363350 107 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 RNU4-48P-201ENST00000365559 182 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 MIR549A-201ENST00000385268 96 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 SNORA75.2-201ENST00000391138 150 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 SNORA75.3-201ENST00000391231 150 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 MRPL42P3-201ENST00000401492 326 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 AC112204.1-201ENST00000502591 103 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 SNORA70.12-201ENST00000516084 153 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 RN7SKP12-201ENST00000516275 143 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-1069P-201ENST00000516612 133 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 SUB1P2-201ENST00000556401 297 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 Z99497.2-201ENST00000603634 310 ntBASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.22□□□□□ -2.37
TRAV4A0A0B4J268 AC027514.1-201ENST00000588561 1603 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 Y_RNA.97-201ENST00000363094 102 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-1335P-201ENST00000365426 107 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-116P-201ENST00000384042 109 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 SNORA36A-201ENST00000384221 132 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 SNORD115.1-201ENST00000391109 76 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 ELOCP4-201ENST00000420090 333 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 MTCO2P12-201ENST00000427426 682 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC245047.3-201ENST00000429428 127 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC074290.1-201ENST00000448883 135 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 SNRPGP9-201ENST00000456025 225 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC002350.1-201ENST00000490759 375 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC022493.2-201ENST00000506122 481 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 MTND4LP18-201ENST00000526864 291 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC016256.1-201ENST00000547971 354 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC091805.2-201ENST00000603848 235 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AL359075.3-201ENST00000613288 217 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AC068787.1-201ENST00000623908 691 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 AL445984.1-201ENST00000637834 659 ntBASIC0.21□□□□□ -2.38
TRAV4A0A0B4J268 RNU4-1-201ENST00000363925 141 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms