Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GTF3C3Q9Y5Q9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 U8.9-201ENST00000365667 134 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-463P-201ENST00000384340 107 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR592-201ENST00000384959 97 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR548B-201ENST00000385247 97 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 LINC01399-202ENST00000458450 244 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 AC025465.3-201ENST00000510570 311 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 RN7SKP92-201ENST00000517266 244 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 AC006380.1-201ENST00000603598 186 ntBASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GTF3C3Q9Y5Q9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 RNA5SP505-201ENST00000364748 108 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 Y_RNA.332-201ENST00000365271 113 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-937P-201ENST00000384325 106 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-21P-201ENST00000384710 107 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 RN7SKP156-201ENST00000410308 342 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AC096920.1-201ENST00000423991 241 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 DNAJC19P7-201ENST00000428811 344 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 SNORA4.4-201ENST00000515921 135 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-991P-201ENST00000516168 107 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AP003733.2-201ENST00000529409 171 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AL356218.2-201ENST00000605264 187 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 SNORD113-5-201ENST00000607261 78 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 AC004467.1-201ENST00000615678 330 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.37□□□□□ -1.71
GTF3C3Q9Y5Q9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 Y_RNA.144-201ENST00000363521 113 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 PRELID3BP1-201ENST00000457142 540 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 RN7SKP43-201ENST00000516173 320 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU7-110P-201ENST00000516891 62 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR3126-201ENST00000577443 74 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR4300-201ENST00000581016 96 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 AC025754.2-201ENST00000606491 432 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 U3.45-201ENST00000607547 219 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 7SK.10-201ENST00000621414 298 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 snoZ196.1-201ENST00000625269 89 ntBASIC4.36□□□□□ -1.71
GTF3C3Q9Y5Q9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU1-70P-201ENST00000362618 164 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-1072P-201ENST00000384703 107 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-443P-201ENST00000384780 107 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR1302-6-201ENST00000408466 90 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR1185-2-201ENST00000408687 86 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR4423-201ENST00000580922 80 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR8062-201ENST00000621515 85 ntBASIC4.35□□□□□ -1.71
GTF3C3Q9Y5Q9 MFSD8-233ENST00000641482 4860 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 Y_RNA.64-201ENST00000362845 102 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 Y_RNA.99-201ENST00000363138 105 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-1235P-201ENST00000384559 107 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 Y_RNA.570-201ENST00000384750 101 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 RNU6-498P-201ENST00000459468 107 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 AL161670.1-201ENST00000554348 137 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 AC136932.1-201ENST00000574771 208 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 MIR4715-201ENST00000584117 79 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 U4.1-201ENST00000620349 87 ntBASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.34□□□□□ -1.71
GTF3C3Q9Y5Q9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GTF3C3Q9Y5Q9 AC108206.1-201ENST00000570186 4159 ntBASIC4.34□□□□□ -1.72
GTF3C3Q9Y5Q9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 AL590004.2-201ENST00000404787 371 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 RN7SKP284-201ENST00000411002 343 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 RPL39P40-201ENST00000445481 146 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 AL357134.1-201ENST00000445848 426 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 PRELID2P1-201ENST00000552837 301 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 AC007448.1-201ENST00000582714 234 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 uc_338.1-201ENST00000612113 180 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.33□□□□□ -1.72
GTF3C3Q9Y5Q9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 SNORD113-8-201ENST00000363497 74 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU1-91P-201ENST00000364746 163 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 SNORA3.3-201ENST00000408712 125 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU2-20P-201ENST00000410425 191 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms