Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU4-11P-201ENST00000365287 132 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNU6-541P-201ENST00000384709 110 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNU6-239P-201ENST00000390990 99 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AP000567.1-201ENST00000406413 156 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 BTF3P11-201ENST00000426582 477 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC243964.1-201ENST00000441814 261 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC010285.1-201ENST00000470580 392 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 SNORA31.20-201ENST00000517111 133 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNA5SP290-201ENST00000517133 127 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RN7SKP289-201ENST00000517244 295 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AP002001.1-203ENST00000534002 267 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 UBL5P2-201ENST00000583788 219 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 AC018692.3-201ENST00000623929 123 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 MIR3658-201ENST00000636291 56 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 RNU4-17P-201ENST00000365598 141 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 RPL21P66-201ENST00000426566 466 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 AC005042.3-201ENST00000453230 174 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 HMGN2P16-201ENST00000456802 261 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 RNU6-1211P-201ENST00000459179 105 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 RNU6-58P-201ENST00000517143 103 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 AC092593.1-201ENST00000515413 1815 ntBASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMPD4Q9NXE4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 SNORD32A-201ENST00000364805 84 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 RNU6-275P-201ENST00000364910 107 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 Y_RNA.542-201ENST00000384641 111 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 RNU6-1199P-201ENST00000411249 104 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AC138623.1-201ENST00000418060 216 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AC007919.1-201ENST00000429380 217 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 SNORA43.2-201ENST00000516652 128 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AL451007.1-201ENST00000595491 289 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 U6.98-201ENST00000637157 84 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 AC068700.1-201ENST00000565862 3754 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.31□□□□□ -1.88
SMPD4Q9NXE4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 RNU6-429P-201ENST00000384582 108 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC098614.2-201ENST00000426040 255 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 PTGES3P4-201ENST00000426243 356 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC010095.1-201ENST00000443543 144 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC100767.1-201ENST00000528178 123 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 MIR5047-201ENST00000579212 100 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 DEFB117-201ENST00000602356 141 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC090132.2-201ENST00000615881 347 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 AC068831.7-201ENST00000616954 363 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 SCARNA4-202ENST00000625402 129 ntBASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms