Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL359697.1-201ENST00000624879 587 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
CLN6Q9NWW5 Y_RNA.169-201ENST00000363745 96 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 RNA5SP219-201ENST00000390940 113 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 RNU7-180P-201ENST00000459240 63 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.09□□□□□ -2.23
CLN6Q9NWW5 RNU1-92P-201ENST00000517017 135 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 MTND4P7-201ENST00000523876 130 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.09□□□□□ -2.23
CLN6Q9NWW5 AC016256.1-201ENST00000547971 354 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 AC090115.3-201ENST00000553218 849 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 AC004223.2-201ENST00000590309 544 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 NIFKP6-201ENST00000598115 845 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 AP003465.2-201ENST00000602571 373 ntBASIC1.09□□□□□ -2.23
CLN6Q9NWW5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CLN6Q9NWW5 BX322639.1-202ENST00000423987 2213 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 RNU6-227P-201ENST00000362865 103 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 SNORA72.2-201ENST00000365028 127 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 RNU6-996P-201ENST00000365438 107 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 EIF1P1-201ENST00000421436 341 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AC073910.1-201ENST00000445047 438 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 RNU6-1037P-201ENST00000459571 107 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 MTND3P7-201ENST00000474435 343 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 MTCO2P4-201ENST00000517968 247 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 RNU6-323P-201ENST00000521915 107 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AC026470.2-201ENST00000561492 181 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 MIR4303-201ENST00000581299 66 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 AC104458.1-201ENST00000608243 463 ntBASIC1.08□□□□□ -2.24
CLN6Q9NWW5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CLN6Q9NWW5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.07□□□□□ -2.24
CLN6Q9NWW5 Y_RNA.159-201ENST00000363674 87 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 MIR618-201ENST00000385287 98 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AL606923.1-201ENST00000406616 190 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.07□□□□□ -2.24
CLN6Q9NWW5 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AC073415.1-201ENST00000449240 153 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 RPL31P58-201ENST00000469001 379 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AC114982.1-201ENST00000469402 321 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 RPS26P45-201ENST00000471748 340 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 ARL2BPP4-201ENST00000506854 471 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AC010493.1-201ENST00000513479 292 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.07□□□□□ -2.24
CLN6Q9NWW5 MIR4709-201ENST00000577272 72 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 MIR5006-201ENST00000583027 110 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 AC005609.4-201ENST00000625071 447 ntBASIC1.07□□□□□ -2.24
CLN6Q9NWW5 RN7SKP142-201ENST00000411236 328 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 MTND3P9-201ENST00000429526 346 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 snoU13.26-201ENST00000459452 105 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 U8.21-201ENST00000459536 136 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 RNU6-948P-201ENST00000516374 107 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 RNU6-548P-201ENST00000517083 115 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 MIR4760-201ENST00000585040 80 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AL158827.2-201ENST00000602494 330 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AC016727.2-201ENST00000603988 621 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 HULC.1-201ENST00000612720 240 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 TCL6_2.1-201ENST00000615162 119 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 AL691447.3-201ENST00000635020 330 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 MIR338-201ENST00000636369 67 ntBASIC1.06□□□□□ -2.24
CLN6Q9NWW5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CLN6Q9NWW5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CLN6Q9NWW5 SNORA29-201ENST00000384183 140 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 MIR194-1-201ENST00000384892 85 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 RNA5SP494-201ENST00000410653 129 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 OOSP1P1-201ENST00000423265 274 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 SNX2P2-201ENST00000424553 323 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 USP9YP14-201ENST00000430663 563 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AL031667.1-201ENST00000440222 725 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AC004386.2-201ENST00000441858 148 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AC016717.1-201ENST00000448918 286 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 RNU6-498P-201ENST00000459468 107 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 CCDC34P1-201ENST00000507441 517 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AC025465.4-201ENST00000513422 638 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 SNORA14.1-201ENST00000516113 141 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms