Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXD4L1Q9NU39 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXD4L1Q9NU39 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXD4L1Q9NU39 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
FOXD4L1Q9NU39 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXD4L1Q9NU39 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-363P-201ENST00000362895 105 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-1125P-201ENST00000363601 107 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 AC107083.1-201ENST00000439643 279 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 AL450023.3-201ENST00000440592 271 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 AC087499.4-201ENST00000448505 178 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-513P-201ENST00000516104 104 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 MIR5588-201ENST00000581890 63 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 MIR4302-201ENST00000638058 60 ntBASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.94□□□□□ -1.46
FOXD4L1Q9NU39 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 MIR323A-201ENST00000362199 86 ntBASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 RPS12P18-201ENST00000442381 270 ntBASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 AC078899.2-201ENST00000595282 212 ntBASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 MAPK10-349ENST00000641767 3661 ntBASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXD4L1Q9NU39 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 LINC01355-201ENST00000566551 5444 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 SNORD115-19-201ENST00000363098 82 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 SNORA51.1-201ENST00000363243 140 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 SNORD115-18-201ENST00000363293 82 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 RNU4-67P-201ENST00000364569 141 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 SNORD115-17-201ENST00000364612 82 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 RNA5SP323-201ENST00000391094 133 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 RNU7-94P-201ENST00000459576 63 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 AC073073.1-201ENST00000493920 463 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 HMGN2P6-201ENST00000551091 273 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 AC074101.1-201ENST00000637861 241 ntBASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.92□□□□□ -1.46
FOXD4L1Q9NU39 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 AL133243.3-201ENST00000617415 3004 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-979P-201ENST00000383896 107 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-787P-201ENST00000384032 107 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 AL627390.1-201ENST00000396055 340 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 MIR1182-201ENST00000408363 97 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 SNORA77-201ENST00000408716 125 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-402P-201ENST00000410678 103 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 AL022718.1-201ENST00000412004 84 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 AL356387.2-201ENST00000422272 243 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 SNX2P2-201ENST00000424553 323 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 RNU6-857P-201ENST00000515893 110 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 HSPE1P19-201ENST00000603327 295 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 AL691477.1-201ENST00000624398 162 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 MIR1255B1-201ENST00000636325 63 ntBASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
FOXD4L1Q9NU39 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 MIR342-201ENST00000362212 99 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 SNORD45B-201ENST00000364617 72 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 Y_RNA.437-201ENST00000384113 113 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 SNORA17A-201ENST00000391185 133 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 RPL21P3-201ENST00000395517 478 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 RN7SKP200-201ENST00000410564 320 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 RN7SKP286-201ENST00000410894 299 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 AL035398.1-201ENST00000430869 322 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 SNORA71B-202ENST00000439232 272 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 AL357552.1-201ENST00000445254 415 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 RPS23P4-201ENST00000487908 423 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 ENPP7P9-201ENST00000514456 627 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 RNA5SP440-201ENST00000612665 119 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 SNORA17.5-201ENST00000630429 132 ntBASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
FOXD4L1Q9NU39 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
FOXD4L1Q9NU39 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms