Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL359672.1-201ENST00000442302 409 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 RNU7-14P-201ENST00000459331 62 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.665-201ENST00000516177 98 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 AC090517.1-201ENST00000569307 266 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 AC068137.3-201ENST00000639191 341 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 LINC02555-201ENST00000563933 1951 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 SNORA32.2-201ENST00000384049 122 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 MIR487A-201ENST00000385009 80 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 EIF4E2P1-201ENST00000393781 255 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 MIR450B-201ENST00000401182 78 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC123900.1-201ENST00000420390 96 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 UBE2V1P4-201ENST00000425374 344 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 ERLEC1P1-201ENST00000433806 578 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 USP9YP28-201ENST00000435142 589 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 MTND1P1-201ENST00000445453 368 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AL035666.1-201ENST00000446195 348 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC091435.1-201ENST00000505442 584 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC091885.1-201ENST00000506658 268 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 RNU6-314P-201ENST00000516574 104 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC087441.2-201ENST00000529141 262 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 SCOCP1-201ENST00000554676 349 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC022254.1-201ENST00000567857 235 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AL161722.3-201ENST00000605789 2983 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC009994.1-201ENST00000606889 253 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC093783.1-201ENST00000612976 329 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 MIR7843-201ENST00000622274 79 ntBASIC1.29□□□□□ -2.2
HMG20AQ9NP66 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU6-545P-201ENST00000362681 104 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU6-451P-201ENST00000362921 107 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU6-254P-201ENST00000363377 107 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.318-201ENST00000365131 97 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 MIR521-1-201ENST00000384902 87 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 MIR517C-201ENST00000385103 95 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU6-1106P-201ENST00000390845 107 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 SNORA48.1-201ENST00000390879 135 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AL590002.1-201ENST00000406554 418 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 MIR1289-2-201ENST00000408360 111 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNA5SP100-201ENST00000410903 110 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNA5SP59-201ENST00000410922 110 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 CYCSP49-201ENST00000420810 319 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 SEPT14P3-201ENST00000439401 183 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AL732372.2-207ENST00000445840 183 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
HMG20AQ9NP66 SEPT14P2-201ENST00000453405 183 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU7-187P-201ENST00000458985 68 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AC132942.1-201ENST00000486753 483 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 SEPT14P4-201ENST00000513445 186 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU6-506P-201ENST00000516553 94 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU5F-4P-201ENST00000516581 114 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 FO082796.1-201ENST00000523795 183 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AC016727.2-201ENST00000603988 621 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 CYP2C61P-201ENST00000604072 290 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 MIR3976-201ENST00000606807 139 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AC103810.8-201ENST00000607347 118 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AC005520.5-201ENST00000613926 164 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AC073534.2-201ENST00000620377 381 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 AC099654.12-201ENST00000639868 649 ntBASIC1.28□□□□□ -2.2
HMG20AQ9NP66 RNU5B-2P-201ENST00000363036 113 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 Y_RNA.256-201ENST00000364594 104 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 RNU6-438P-201ENST00000365561 103 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 Y_RNA.554-201ENST00000384672 102 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 RNA5SP212-201ENST00000391223 107 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AL590632.1-201ENST00000424289 371 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 snoU13.26-201ENST00000459452 105 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 RN7SL429P-201ENST00000479090 223 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 RN7SL489P-201ENST00000486185 223 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AC010409.1-201ENST00000487382 476 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 RN7SL327P-201ENST00000488659 223 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AF186996.7-201ENST00000492781 209 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 270.7 ms