Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 EBAG9P1-201ENST00000418955 543 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.704-201ENST00000516851 102 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC109479.2-201ENST00000517842 174 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AP005597.4-201ENST00000526762 229 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC025423.5-201ENST00000550230 219 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AL161670.1-201ENST00000554348 137 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 MIR3136-201ENST00000583498 78 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 BNIP3P16-201ENST00000589779 534 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC078795.3-201ENST00000602913 472 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 PRR13P7-201ENST00000605538 430 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC064836.2-201ENST00000609491 462 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 AC017083.3-201ENST00000609955 700 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 SNORA7.1-201ENST00000363750 139 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 RNU4-13P-201ENST00000364019 141 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 RNU4-56P-201ENST00000364700 142 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.372-201ENST00000365599 102 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 RNU6-26P-201ENST00000383985 107 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.504-201ENST00000384481 104 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.559-201ENST00000384686 107 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AP000275.1-201ENST00000411943 390 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AC244670.1-201ENST00000436879 112 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 RNU6-261P-201ENST00000459506 102 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AC130509.1-201ENST00000464158 433 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 NBR2-204ENST00000587322 63 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 AP001330.5-201ENST00000607176 411 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 ZNF209P-201ENST00000593450 2304 ntBASIC1.51□□□□□ -2.17
TM9SF3Q9HD45 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 SNORD114-6-201ENST00000364393 72 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 SNORD32B-201ENST00000364460 84 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1141P-201ENST00000364520 107 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.332-201ENST00000365271 113 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1068P-201ENST00000410958 103 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 SNORA14.1-201ENST00000516113 141 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 RNU6-323P-201ENST00000521915 107 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC245008.1-201ENST00000608123 476 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC092954.2-201ENST00000609103 430 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC124864.2-201ENST00000624736 186 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 SNORA43.4-201ENST00000629559 138 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AL450472.1-202ENST00000637286 180 ntBASIC1.5□□□□□ -2.17
TM9SF3Q9HD45 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 RNU6-142P-201ENST00000384019 107 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 RNU6-378P-201ENST00000384324 107 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 MTCO3P40-201ENST00000392516 676 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC123900.1-201ENST00000420390 96 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 TIMM9P3-201ENST00000428659 274 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 MTND3P16-201ENST00000452205 344 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 RNU7-138P-201ENST00000459479 64 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 SRRM1P2-201ENST00000464531 1192 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC083798.1-201ENST00000472671 131 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 RNU6-189P-201ENST00000516120 101 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 RNU6-835P-201ENST00000516974 104 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC069113.1-201ENST00000517763 267 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 CENPUP1-201ENST00000526649 1202 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC109446.1-201ENST00000566172 220 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AL357078.3-201ENST00000607528 618 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 AC092807.2-201ENST00000609367 243 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 MIR7111-201ENST00000619751 72 ntBASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TM9SF3Q9HD45 MTND5P10-201ENST00000603719 1809 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 RNU6-438P-201ENST00000365561 103 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1042P-201ENST00000384204 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms