Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
SPC25Q9HBM1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPC25Q9HBM1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 RNU6-280P-201ENST00000364145 104 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 SNORD42.2-201ENST00000365570 69 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 MIR549A-201ENST00000385268 96 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 SNORA69.1-201ENST00000390904 137 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 RNU6-159P-201ENST00000391080 106 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 AL138827.1-201ENST00000402666 306 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 Y_RNA.605-201ENST00000410577 105 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 MRPS18CP6-201ENST00000423587 223 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 MTCO2P12-201ENST00000427426 682 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.17□□□□□ -1.9
SPC25Q9HBM1 Y_RNA.639-201ENST00000458981 102 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 RPS23P5-201ENST00000495419 428 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.17□□□□□ -1.9
SPC25Q9HBM1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.17□□□□□ -1.9
SPC25Q9HBM1 RNU2-44P-201ENST00000516795 194 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 AC090617.3-201ENST00000573670 475 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.17□□□□□ -1.9
SPC25Q9HBM1 MIR6715A-201ENST00000615929 79 ntBASIC3.17□□□□□ -1.9
SPC25Q9HBM1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SPC25Q9HBM1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SPC25Q9HBM1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SPC25Q9HBM1 RNU6-874P-201ENST00000362390 105 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 Y_RNA.252-201ENST00000364556 101 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 RNU6-234P-201ENST00000365229 104 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 Y_RNA.358-201ENST00000365491 99 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 RNU6-245P-201ENST00000384020 107 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 AC114482.1-201ENST00000418010 247 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 WARS2P1-201ENST00000429678 537 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 AC004386.2-201ENST00000441858 148 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.16□□□□□ -1.9
SPC25Q9HBM1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 RNU6-667P-201ENST00000517186 102 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.16□□□□□ -1.9
SPC25Q9HBM1 MIR5006-201ENST00000583027 110 ntBASIC3.16□□□□□ -1.9
SPC25Q9HBM1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPC25Q9HBM1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPC25Q9HBM1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SPC25Q9HBM1 RNU6-222P-201ENST00000362438 107 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 RNU6-743P-201ENST00000364151 106 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.395-201ENST00000383945 109 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.445-201ENST00000384168 102 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 RNU1-139P-201ENST00000391307 165 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 TRBV12-1-201ENST00000479785 344 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 AC018868.1-201ENST00000491307 315 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.15□□□□□ -1.91
SPC25Q9HBM1 SNORA25.14-201ENST00000516481 132 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.701-201ENST00000516812 110 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 SNRPGP18-201ENST00000553000 214 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 UBL5P4-201ENST00000562584 236 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 AC005296.1-201ENST00000616145 209 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 MIR1248-201ENST00000629190 106 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.15□□□□□ -1.91
SPC25Q9HBM1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.15□□□□□ -1.91
SPC25Q9HBM1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SPC25Q9HBM1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SPC25Q9HBM1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.5-201ENST00000362334 102 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.112-201ENST00000363250 102 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 RNU6-611P-201ENST00000384276 104 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 AL357139.1-201ENST00000407792 426 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 AL445305.1-201ENST00000432577 575 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 AC244505.4-201ENST00000434905 287 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 SSXP5-201ENST00000443473 287 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 MTCO3P8-201ENST00000453691 755 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 AC096725.1-201ENST00000514266 313 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 RNU6-1098P-201ENST00000516772 96 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 MIR5695-201ENST00000579717 85 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 AL132822.1-201ENST00000617063 513 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 uc_338.22-201ENST00000622722 187 ntBASIC3.14□□□□□ -1.91
SPC25Q9HBM1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
SPC25Q9HBM1 RNU6-873P-201ENST00000363833 107 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 RNU4-76P-201ENST00000364509 141 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.394-201ENST00000383942 103 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 Y_RNA.557-201ENST00000384680 107 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 MIR10B-201ENST00000385011 110 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AL513328.1-201ENST00000446460 224 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 RNU7-14P-201ENST00000459331 62 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 RNU7-169P-201ENST00000459456 61 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AC034114.1-201ENST00000520293 285 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.13□□□□□ -1.91
SPC25Q9HBM1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AC091544.4-201ENST00000555268 342 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 ANP32BP3-201ENST00000559213 706 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AC087588.2-201ENST00000617667 426 ntBASIC3.13□□□□□ -1.91
SPC25Q9HBM1 AC243829.7-201ENST00000633081 225 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms