Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 MIR1283-1-201ENST00000408494 87 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 U6atac.2-201ENST00000408644 118 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RNU5E-9P-201ENST00000411164 104 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RPS12P18-201ENST00000442381 270 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AL133162.1-201ENST00000463228 453 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RPS27AP9-201ENST00000477681 438 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RAC1P2-201ENST00000511164 579 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC021269.2-201ENST00000532318 330 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC074050.1-201ENST00000563247 211 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VRTNQ9H8Y1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 RNU6-1048P-201ENST00000364054 107 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 RNU6-704P-201ENST00000364162 103 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 RNA5SP240-201ENST00000365355 128 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.357-201ENST00000365487 109 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 RNU1-89P-201ENST00000384592 164 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.580-201ENST00000391004 95 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 AC074290.1-201ENST00000448883 135 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 RNU7-57P-201ENST00000459540 60 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 MIR2114-201ENST00000516645 80 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 RNU6-586P-201ENST00000517265 104 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 MIR4753-201ENST00000585119 83 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 AC004832.4-201ENST00000608952 331 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 AC099778.2-201ENST00000610904 211 ntBASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.07□□□□□ -1.76
VRTNQ9H8Y1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.23-201ENST00000362496 106 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 SNORA68.1-201ENST00000364537 132 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.310-201ENST00000365063 113 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 SNORD50.2-201ENST00000365465 70 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 RNU6-1274P-201ENST00000384557 107 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 MIR218-1-201ENST00000384999 110 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 RN7SKP156-201ENST00000410308 342 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 AC126124.2-201ENST00000413542 321 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 AC083906.5-201ENST00000503722 328 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 AL020997.2-201ENST00000602607 184 ntBASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.06□□□□□ -1.76
VRTNQ9H8Y1 AC110774.1-201ENST00000623567 2018 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 RNU6-234P-201ENST00000365229 104 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 AP002088.1-201ENST00000382740 395 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.412-201ENST00000384001 104 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 SNORA8.3-201ENST00000384679 139 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 RNU6-381P-201ENST00000391259 108 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 RPL30P4-201ENST00000429309 333 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 AC114982.1-201ENST00000469402 321 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 AC026402.1-201ENST00000513642 170 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 Y_RNA.797-201ENST00000515977 94 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 AP001485.1-201ENST00000604799 199 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 AC025754.2-201ENST00000606491 432 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 MTND1P7-201ENST00000632801 297 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRTNQ9H8Y1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 RNU6-944P-201ENST00000364023 107 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 U8.11-201ENST00000384699 133 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 MIR626-201ENST00000385032 94 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 AL139095.1-201ENST00000404326 391 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 AL355497.1-201ENST00000406262 551 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 MIR548I2-201ENST00000408348 149 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 RNU6-1328P-201ENST00000410938 106 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 SNORA57.3-201ENST00000411095 141 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 U8.18-201ENST00000459285 133 ntBASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.04□□□□□ -1.76
VRTNQ9H8Y1 RN7SKP164-201ENST00000516138 266 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms