Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC107297.1-201ENST00000459991 176 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 RN7SKP46-201ENST00000515942 234 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP360-201ENST00000516555 118 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 RNU1-117P-201ENST00000517041 158 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 RNU6-365P-201ENST00000517113 106 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC009163.5-201ENST00000575421 637 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 MIR4524B-201ENST00000581569 115 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC090897.2-201ENST00000581715 130 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 MIR3136-201ENST00000583498 78 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 POLR3GP1-201ENST00000594073 261 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 MIR7843-201ENST00000622274 79 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 RNU1-75P-201ENST00000347264 129 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 SNORA60-201ENST00000362396 134 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 SNORD114-7-201ENST00000362520 77 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 RNU4-41P-201ENST00000364426 143 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP97-201ENST00000365006 84 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 RNU1-73P-201ENST00000383971 164 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 RNU6-622P-201ENST00000384272 103 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 COX5BP7-201ENST00000414780 274 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AL139281.1-201ENST00000422120 335 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AF228730.3-201ENST00000436691 102 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 SNORA18.4-201ENST00000516440 124 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 SNORA31.20-201ENST00000517111 133 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 MTND6P33-201ENST00000571794 183 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 MIR3923-201ENST00000579521 83 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AL049861.1-201ENST00000603130 150 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 FAM71BP1-201ENST00000604431 523 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AL033523.1-201ENST00000605153 153 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 MIR7106-201ENST00000612419 65 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 TCL6_2.1-201ENST00000615162 119 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AC018692.3-201ENST00000623929 123 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 AL136360.1-201ENST00000503377 1900 ntBASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.1□□□□□ -1.75
COL25A1Q9BXS0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AL139811.1-201ENST00000424779 2299 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP374-201ENST00000362939 125 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 Y_RNA.78-201ENST00000362970 110 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 Y_RNA.634-201ENST00000364811 113 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 MIR1271-201ENST00000408537 86 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RNU2-70P-201ENST00000410718 179 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 Z74021.1-201ENST00000423610 407 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AC002075.2-201ENST00000425207 252 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RPL23AP62-201ENST00000463396 453 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AC078817.1-201ENST00000492623 435 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AC108022.1-201ENST00000493466 478 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RPL30P5-201ENST00000494923 336 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RPL23AP54-201ENST00000495129 419 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AC023141.12-201ENST00000512399 199 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 SNORA70.16-201ENST00000516390 95 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RNU4-60P-201ENST00000517239 135 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AL161713.1-201ENST00000555538 145 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 FTX_3.1-201ENST00000610451 147 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AL162274.2-201ENST00000614406 332 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 MIR7112-201ENST00000616126 65 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 AC005562.2-201ENST00000618264 111 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 BMS1P21-201ENST00000634565 365 ntBASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL25A1Q9BXS0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
COL25A1Q9BXS0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL25A1Q9BXS0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL25A1Q9BXS0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
COL25A1Q9BXS0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.09□□□□□ -1.76
COL25A1Q9BXS0 AC004925.1-201ENST00000624256 2706 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 Y_RNA.124-201ENST00000363339 93 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 U3.8-201ENST00000363675 217 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 SNORA67.2-201ENST00000384300 149 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 SNORD116-13-201ENST00000384408 92 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms