Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.87□□□□□ -1.95
VRK1Q99986 AC023141.11-201ENST00000508864 202 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 AC025465.3-201ENST00000510570 311 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 AC074133.1-201ENST00000515696 183 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 RNA5SP217-201ENST00000515959 91 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 RNU6-397P-201ENST00000516226 104 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 RNU6-586P-201ENST00000517265 104 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 HSPE1P18-201ENST00000517602 280 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
VRK1Q99986 AC018630.3-201ENST00000542637 96 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 MYL12BP1-201ENST00000569826 507 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.87□□□□□ -1.95
VRK1Q99986 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 U4.1-201ENST00000620349 87 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 MTND5P35-201ENST00000557537 1720 ntBASIC2.87□□□□□ -1.95
VRK1Q99986 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VRK1Q99986 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VRK1Q99986 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.86□□□□□ -1.95
VRK1Q99986 Z82209.1-201ENST00000422141 2135 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AL356274.2-201ENST00000624379 3752 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 Y_RNA.19-201ENST00000362462 99 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNU6-461P-201ENST00000364195 107 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNU6-1274P-201ENST00000384557 107 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AL079342.1-201ENST00000401460 267 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RN7SKP111-201ENST00000410349 271 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.86□□□□□ -1.95
VRK1Q99986 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.86□□□□□ -1.95
VRK1Q99986 AC004386.2-201ENST00000441858 148 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AC009237.7-201ENST00000447357 229 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AC091179.3-201ENST00000474761 144 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RPL26P26-201ENST00000480251 434 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNY3P15-201ENST00000516297 97 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 RNU2-44P-201ENST00000516795 194 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 DEFB131C-201ENST00000528817 165 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AL161670.1-201ENST00000554348 137 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AC004817.2-201ENST00000561794 651 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AC233702.2-202ENST00000562547 291 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 MIR5680-201ENST00000577577 84 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.86□□□□□ -1.95
VRK1Q99986 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.86□□□□□ -1.95
VRK1Q99986 MZT1P2-201ENST00000604387 248 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 MIR8062-201ENST00000621515 85 ntBASIC2.86□□□□□ -1.95
VRK1Q99986 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.86□□□□□ -1.95
VRK1Q99986 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.86□□□□□ -1.95
VRK1Q99986 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VRK1Q99986 SNORA18.2-201ENST00000383865 132 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 SNORD63-201ENST00000384262 68 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 SNORD115-46-201ENST00000390982 71 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VRK1Q99986 RNA5SP344-201ENST00000411081 104 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 AL513477.1-202ENST00000417061 214 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 AC244505.4-201ENST00000434905 287 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 IPO7P1-201ENST00000442031 636 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 SSXP5-201ENST00000443473 287 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 EEF1B2P7-201ENST00000451177 676 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 LINC01399-202ENST00000458450 244 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 AC083906.5-201ENST00000503722 328 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.85□□□□□ -1.95
VRK1Q99986 MIR3149-201ENST00000584629 83 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 AC011476.5-201ENST00000615594 130 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 MIR7112-201ENST00000616126 65 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.85□□□□□ -1.95
VRK1Q99986 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VRK1Q99986 LINC02555-201ENST00000563933 1951 ntBASIC2.85□□□□□ -1.95
VRK1Q99986 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.95
VRK1Q99986 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VRK1Q99986 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 RNU6-26P-201ENST00000383985 107 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 RNU6-926P-201ENST00000384075 107 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 Y_RNA.462-201ENST00000384268 102 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 RNU6-713P-201ENST00000384761 107 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 MIR1294-201ENST00000408503 142 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 Z92545.1-201ENST00000411782 234 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.84□□□□□ -1.95
VRK1Q99986 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.84□□□□□ -1.95
VRK1Q99986 IFNA11P-201ENST00000446352 526 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.84□□□□□ -1.95
VRK1Q99986 CYP2C59P-201ENST00000457790 269 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 AC090515.1-201ENST00000465295 476 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 SNORA40.9-201ENST00000515895 93 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 RNU1-143P-201ENST00000516296 146 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 AC023824.2-201ENST00000566185 400 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 MIR5006-201ENST00000583027 110 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 AL356280.1-201ENST00000603614 379 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 U1.23-201ENST00000610293 146 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 AC107871.2-201ENST00000612894 502 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 RNU1-68P-201ENST00000615382 146 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 U1.39-201ENST00000621562 146 ntBASIC2.84□□□□□ -1.95
VRK1Q99986 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK1Q99986 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK1Q99986 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms