Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA25.7-201ENST00000364375 127 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-335P-201ENST00000364563 113 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 MIR325-201ENST00000385260 98 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 RN7SKP177-201ENST00000410567 355 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 AC125238.1-201ENST00000448842 249 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 HSPE1P13-201ENST00000451143 297 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 IFNWP4-201ENST00000453148 294 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 RPL23AP70-201ENST00000483361 460 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 SNORA31.16-201ENST00000516773 139 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 FTX_3.1-201ENST00000610451 147 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 MIR3529-201ENST00000637713 78 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-525P-201ENST00000363685 104 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 Y_RNA.393-201ENST00000383936 102 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 RNU1-73P-201ENST00000383971 164 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 SNORA40.5-201ENST00000391061 128 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 AL031003.1-201ENST00000404229 172 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 DBIP2-201ENST00000419076 262 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 RBMY2UP-201ENST00000453474 324 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 SNORA31.8-201ENST00000516327 108 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 MIR5688-201ENST00000580619 83 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 MIR5195-201ENST00000583555 115 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 AC110741.2-201ENST00000605278 268 ntBASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHKBP1Q8TBC3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 Z73965.1-201ENST00000623412 2297 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 RNU6-235P-201ENST00000362644 107 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 Y_RNA.294-201ENST00000364916 102 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 Y_RNA.368-201ENST00000365547 113 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 RNU6-1228P-201ENST00000391014 107 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 RPS27P1-201ENST00000450552 247 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 RPL26P9-201ENST00000457466 433 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 RNU6-772P-201ENST00000516042 105 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 Y_RNA.694-201ENST00000516677 117 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 MIR5582-201ENST00000579697 68 ntBASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.77□□□□□ -1.81
SHKBP1Q8TBC3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 ADAM3A-203ENST00000461344 2157 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 RNU1-33P-201ENST00000364249 162 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 Y_RNA.229-201ENST00000364347 113 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 SNORA18.3-201ENST00000384122 132 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 RNU6-217P-201ENST00000384164 104 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 Y_RNA.521-201ENST00000384560 114 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 SNORA75.5-201ENST00000391291 81 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 AL606845.1-201ENST00000404881 255 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 RNU6-710P-201ENST00000410424 105 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 AC019205.3-201ENST00000424573 156 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 RPL39P29-201ENST00000447779 157 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 BX510359.1-201ENST00000456973 237 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 RPS4XP13-201ENST00000483219 789 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 SNRPGP15-201ENST00000600149 222 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 U6.95-201ENST00000636931 70 ntBASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHKBP1Q8TBC3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 RNU6-728P-201ENST00000365375 104 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 HMGN2P30-201ENST00000423237 256 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 AIMP1P2-201ENST00000425294 312 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 RPS29P31-201ENST00000446147 164 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 RPL37P4-201ENST00000448908 268 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 snoU13.4-201ENST00000458916 104 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 AC090525.1-201ENST00000479116 478 ntBASIC3.75□□□□□ -1.81
SHKBP1Q8TBC3 AC025518.1-201ENST00000479856 347 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms