Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC011406.1-201ENST00000512440 370 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 RNU6-1041P-201ENST00000516254 102 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC109446.2-201ENST00000567872 497 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC090517.1-201ENST00000569307 266 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 TMF1P1-201ENST00000576058 373 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 MIR4703-201ENST00000577728 79 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC245884.10-201ENST00000597355 337 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AC092354.1-201ENST00000606057 376 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 AP001596.2-201ENST00000608410 312 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 RNU6-534P-201ENST00000364877 106 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 RNU6-827P-201ENST00000365553 106 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 RNU4-48P-201ENST00000365559 182 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 SNORD70.1-201ENST00000391007 85 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 MIR300-201ENST00000401138 83 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC012306.1-201ENST00000423267 114 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 USP9YP28-201ENST00000435142 589 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 COX6CP14-201ENST00000469580 174 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AK3P2-201ENST00000507976 429 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 RNA5SP384-201ENST00000516615 116 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC016256.1-201ENST00000547971 354 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC103996.1-201ENST00000555468 102 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC006566.1-201ENST00000608943 513 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AL021879.1-201ENST00000611756 288 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 AC126177.8-201ENST00000618339 1015 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 MIR338-201ENST00000636369 67 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 BX322639.1-202ENST00000423987 2213 ntBASIC0.91□□□□□ -2.26
CLHC1Q8NHS4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 RNY4P34-201ENST00000364779 95 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 RNU6-877P-201ENST00000383868 107 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 Y_RNA.399-201ENST00000383955 105 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 SNORA36A-201ENST00000384221 132 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 Y_RNA.504-201ENST00000384481 104 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 MIR208B-201ENST00000401172 77 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 MIR1276-201ENST00000408707 83 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 USP9YP14-201ENST00000430663 563 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 Y_RNA.673-201ENST00000516306 88 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 CBX3P8-201ENST00000532412 525 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AL442163.3-201ENST00000554110 156 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AGGF1P4-201ENST00000568249 801 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 MIR4742-201ENST00000581069 85 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AC002044.1-201ENST00000606707 158 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AC040896.1-201ENST00000613819 479 ntBASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.9□□□□□ -2.27
CLHC1Q8NHS4 RNU6-266P-201ENST00000364225 107 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 SNORA72.2-201ENST00000365028 127 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 MIR1-2-201ENST00000384961 85 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 MIR222-201ENST00000384992 110 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AC013410.2-201ENST00000422627 201 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AC073910.1-201ENST00000445047 438 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AL031274.1-201ENST00000450334 232 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AL133217.1-201ENST00000450980 425 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 RPS26P45-201ENST00000471748 340 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AL163973.1-201ENST00000484753 577 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 RNU6-1129P-201ENST00000515964 104 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 DEFB131C-201ENST00000528817 165 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 MIR548AB-201ENST00000584917 84 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 RSL24D1P11-201ENST00000591045 491 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AL078603.1-201ENST00000603824 313 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 AC016597.2-201ENST00000613256 341 ntBASIC0.89□□□□□ -2.27
CLHC1Q8NHS4 RNU6-1123P-201ENST00000362347 106 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 MIR518E-201ENST00000385252 88 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 MIR1283-1-201ENST00000408494 87 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 COX6CP10-201ENST00000416832 224 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 MTCO2P34-201ENST00000421994 607 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 RPS29P15-201ENST00000458329 171 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 ARL2BPP4-201ENST00000506854 471 ntBASIC0.88□□□□□ -2.27
CLHC1Q8NHS4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms