Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR488-201ENST00000365739 83 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNU6-820P-201ENST00000384273 107 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP511-201ENST00000410487 115 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNU7-57P-201ENST00000459540 60 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP20-201ENST00000515976 84 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNU6-63P-201ENST00000516690 95 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 TVP23BP1-201ENST00000557500 617 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RPL23AP91-201ENST00000569211 455 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 AL365205.2-201ENST00000594586 68 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 Pinc.1-201ENST00000616452 154 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 AC073308.1-201ENST00000623696 305 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 AC103988.1-201ENST00000566382 2177 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 Y_RNA.111-201ENST00000363248 100 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 SNORA62.3-201ENST00000365110 153 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 MIR181A2-201ENST00000384863 110 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 SNORA12-201ENST00000391162 147 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 RN7SKP202-201ENST00000410439 330 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 YME1L1P1-201ENST00000429435 297 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 CALM2P4-201ENST00000430810 426 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 RBMY2UP-201ENST00000453474 324 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 RPL39P34-201ENST00000477141 156 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 AL929325.1-201ENST00000603096 117 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 AC015726.2-201ENST00000620112 122 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 MIR492-201ENST00000638676 116 ntBASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCUBE3Q8IX30 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SCUBE3Q8IX30 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 Y_RNA.220-201ENST00000364244 109 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 RNU1-13P-201ENST00000384499 162 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 MIR607-201ENST00000385241 96 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AL590004.2-201ENST00000404787 371 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 RNA5SP129-201ENST00000410276 118 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AC010531.2-201ENST00000465012 153 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 RPS29P19-201ENST00000479709 171 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AC078918.1-201ENST00000498515 228 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AL592156.1-201ENST00000508758 304 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 RNA5SP143-201ENST00000516936 115 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 RNU6-365P-201ENST00000517113 106 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 FAM27D1-201ENST00000612308 341 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 MIR3653-201ENST00000625572 110 ntBASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SCUBE3Q8IX30 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 Y_RNA.203-201ENST00000364106 102 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 Y_RNA.323-201ENST00000365157 109 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 MIR554-201ENST00000384874 96 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 RNU6-628P-201ENST00000410675 107 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 AC023141.4-201ENST00000412031 328 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 AC002075.2-201ENST00000425207 252 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 NDUFB1P1-201ENST00000435191 180 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 AC010469.1-201ENST00000463864 576 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 RPL27AP5-201ENST00000469428 449 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 COX6CP6-201ENST00000490840 228 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 AC078817.1-201ENST00000492623 435 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 RN7SKP12-201ENST00000516275 143 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 AC023632.4-201ENST00000517783 191 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 MIR4662B-201ENST00000579498 81 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 AL136964.1-201ENST00000622038 2990 ntBASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
SCUBE3Q8IX30 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 snoU2_19.1-201ENST00000362361 80 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 RNU6-525P-201ENST00000363685 104 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 SNORA11.2-201ENST00000408318 127 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 RNU5F-4P-201ENST00000516581 114 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 RNU6-113P-201ENST00000516653 101 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 AP003730.1-201ENST00000524605 285 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 AC015720.1-201ENST00000565251 277 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 MIR3944-201ENST00000581277 108 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 HSPE1P7-201ENST00000604681 321 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.44□□□□□ -1.7
SCUBE3Q8IX30 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms