Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-976P-201ENST00000516086 111 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNU7-193P-201ENST00000516723 65 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.701-201ENST00000516812 110 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AC022080.3-201ENST00000544433 482 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 PRELID2P1-201ENST00000552837 301 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AC005562.2-201ENST00000618264 111 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 MIR8057-201ENST00000620957 69 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 MTND5P16-201ENST00000460269 1703 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 RNU4-76P-201ENST00000364509 141 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AC007098.1-201ENST00000420122 367 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AC007677.1-201ENST00000445757 515 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 RN7SL297P-201ENST00000483161 293 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 SNORA31.25-201ENST00000517242 134 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AC125232.2-201ENST00000592457 143 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AL031274.2-201ENST00000599419 203 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AC090115.4-201ENST00000609970 188 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 AC090971.5-201ENST00000621102 293 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PPP4R4Q6NUP7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 RNU1-35P-201ENST00000362782 153 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-873P-201ENST00000363833 107 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 RNU4-42P-201ENST00000364738 142 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 SNORA48.2-201ENST00000390926 124 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 MIR1262-201ENST00000408276 93 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 PMCHL1-202ENST00000423102 261 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 EIF1P2-201ENST00000428233 350 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 WARS2P1-201ENST00000429678 537 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 MTCYBP6-201ENST00000441810 138 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AC004386.2-201ENST00000441858 148 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AC093259.1-201ENST00000509755 300 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 SCARNA13-201ENST00000516672 275 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 SNORA31.15-201ENST00000516771 132 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 RNA5SP54-201ENST00000516951 92 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 MIR5004-201ENST00000579078 107 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 AC007318.2-201ENST00000620999 243 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PPP4R4Q6NUP7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-743P-201ENST00000364151 106 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 SNORA71.1-201ENST00000364523 117 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-308P-201ENST00000390957 107 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 SNORA48.5-201ENST00000391143 135 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 HMGN2P39-201ENST00000398005 273 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AL357139.1-201ENST00000407792 426 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 RN7SKP284-201ENST00000411002 343 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 USP9YP16-201ENST00000430287 407 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC096638.1-201ENST00000444678 216 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC011753.1-201ENST00000451001 220 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 USP9YP23-201ENST00000455085 407 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC020661.2-201ENST00000560114 134 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC026470.2-201ENST00000561492 181 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC090617.3-201ENST00000573670 475 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 AC044792.1-201ENST00000593294 196 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.78□□□□□ -1.96
PPP4R4Q6NUP7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PPP4R4Q6NUP7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
PPP4R4Q6NUP7 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
PPP4R4Q6NUP7 RNU6-281P-201ENST00000384212 103 ntBASIC2.77□□□□□ -1.97
PPP4R4Q6NUP7 RNY1P14-201ENST00000384426 108 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 253.7 ms