Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NACAP3-201ENST00000552100 481 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 MIR4738-201ENST00000579134 87 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 MIR3922-201ENST00000585192 84 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 MIR6844-201ENST00000637122 62 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF43Q68DV7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 RNU1-100P-201ENST00000365255 165 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 RNU6-140P-201ENST00000384566 108 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 MIR616-201ENST00000385293 97 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 AC078809.1-201ENST00000427601 140 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 AC244670.1-201ENST00000436879 112 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 AP004242.1-201ENST00000533701 349 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 CR383656.8-201ENST00000549046 145 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 MIR3651-201ENST00000630427 90 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 AL049781.1-201ENST00000623195 3585 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF43Q68DV7 AL356274.2-201ENST00000624379 3752 ntBASIC3.87□□□□□ -1.79
RNF43Q68DV7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF43Q68DV7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF43Q68DV7 AP001486.2-201ENST00000561652 5113 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 AC092268.1-201ENST00000342691 405 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 RNU6-799P-201ENST00000363567 107 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 RNU6-454P-201ENST00000364292 107 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 RNU6-969P-201ENST00000383900 105 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 RNU6-643P-201ENST00000384018 107 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 RNU6-768P-201ENST00000384683 107 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 MIR325-201ENST00000385260 98 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 RNU6-588P-201ENST00000410281 105 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 AC009237.8-201ENST00000445492 379 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 MTATP6P7-201ENST00000453315 681 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 BX510359.1-201ENST00000456973 237 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF43Q68DV7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF43Q68DV7 MIR3646-201ENST00000578301 84 ntBASIC3.86□□□□□ -1.79
RNF43Q68DV7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF43Q68DV7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF43Q68DV7 AC093908.1-201ENST00000623125 8092 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 AC118273.1-201ENST00000525324 3006 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF43Q68DV7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RNF43Q68DV7 SNORA72.4-201ENST00000384174 132 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 MIR15B-201ENST00000385045 98 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 MT-TT-201ENST00000387460 66 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 TOMM22P1-201ENST00000418578 312 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 AC007215.1-201ENST00000464893 276 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 S100A11P1-201ENST00000477525 312 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 HMGB1P22-201ENST00000505315 124 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 RNU6-168P-201ENST00000516189 101 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 RNU6-561P-201ENST00000516222 102 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 SNORA31.23-201ENST00000517219 133 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 RN7SKP57-201ENST00000517248 293 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RNF43Q68DV7 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
RNF43Q68DV7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF43Q68DV7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
RNF43Q68DV7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF43Q68DV7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF43Q68DV7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF43Q68DV7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF43Q68DV7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF43Q68DV7 USP8P1-201ENST00000494673 3183 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 RNU6-235P-201ENST00000362644 107 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 RNU6-283P-201ENST00000364788 107 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 RNU6-245P-201ENST00000384020 107 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 FTH1P15-201ENST00000406984 280 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 AL158823.1-201ENST00000418441 478 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC092047.1-201ENST00000424997 240 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC125238.1-201ENST00000448842 249 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF43Q68DV7 RNA5SP208-201ENST00000516156 78 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 RNU6-844P-201ENST00000517175 102 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC022695.1-201ENST00000522089 237 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF43Q68DV7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF43Q68DV7 MIR6134-201ENST00000617606 109 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF43Q68DV7 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.79
RNF43Q68DV7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF43Q68DV7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.8
RNF43Q68DV7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF43Q68DV7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 RNU6-778P-201ENST00000363269 103 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 Y_RNA.251-201ENST00000364551 99 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 RNA5SP51-201ENST00000364750 119 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 Y_RNA.294-201ENST00000364916 102 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms