Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AC010733.2-201ENST00000589496 5702 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 RNA5SP50-201ENST00000363731 107 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 Y_RNA.251-201ENST00000364551 99 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 SNORA3.3-201ENST00000408712 125 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 RNU2-37P-201ENST00000410695 177 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 CKS1BP6-201ENST00000424932 240 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 RPL23AP7-203ENST00000449021 469 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 CENPBD1P1-201ENST00000464061 469 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 MIR4325-201ENST00000583049 90 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 POLR3GP1-201ENST00000594073 261 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AC008739.2-201ENST00000597006 317 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 RPL12P50-201ENST00000603116 116 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AC006023.1-201ENST00000603944 259 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AL773545.4-201ENST00000637262 310 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 AL513478.4-201ENST00000641636 310 ntBASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF38BQ5VTL8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 SCN1A-220ENST00000641603 12506 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 RNA5SP502-201ENST00000362694 119 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 SNORD45.3-201ENST00000363836 72 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 RNU4-43P-201ENST00000410628 137 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 AL139247.1-201ENST00000422768 325 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 AL121890.1-201ENST00000435457 205 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 RPL35AP15-201ENST00000468042 339 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 HMGN2P9-201ENST00000476875 229 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 RNU6-1098P-201ENST00000516772 96 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 AL138880.2-201ENST00000616214 239 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF38BQ5VTL8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 SNORD114-7-201ENST00000362520 77 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 RNU6-1080P-201ENST00000383982 107 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 MIR490-201ENST00000384865 128 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 MIR1261-201ENST00000408659 82 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 AC063976.4-201ENST00000421971 163 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 RPL23AP54-201ENST00000495129 419 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 AC079598.5-201ENST00000547460 117 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 Y_RNA.757-201ENST00000578934 114 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 AC012640.5-201ENST00000623897 319 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 AC090517.3-201ENST00000625170 141 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 MIR3914-2-201ENST00000637339 95 ntBASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF38BQ5VTL8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF38BQ5VTL8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 RNU6-271P-201ENST00000363858 105 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 SNORA25.7-201ENST00000364375 127 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 SNORA20B-201ENST00000384220 132 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 SNORD116-13-201ENST00000384408 92 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 MIR3074-201ENST00000384885 81 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 Y_RNA.584-201ENST00000391090 114 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 Y_RNA.587-201ENST00000391210 103 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 AL512604.1-201ENST00000404812 257 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 AL355796.1-201ENST00000406706 323 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 MIR1251-201ENST00000408552 70 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 RNA5SP38-201ENST00000410750 119 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 AC005326.1-201ENST00000429197 123 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 RNU7-57P-201ENST00000459540 60 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 AL133162.1-201ENST00000463228 453 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 MIR5582-201ENST00000579697 68 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 MIR4753-201ENST00000585119 83 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 AP003357.1-201ENST00000604497 148 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 uc_338.14-201ENST00000613162 166 ntBASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF38BQ5VTL8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms