Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN1BQ07699 MTCYBP18-201ENST00000501056 747 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN1BQ07699 HMGB3P17-201ENST00000504195 649 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 RNU6-273P-201ENST00000516937 96 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 SNORA31.17-201ENST00000516953 127 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN1BQ07699 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN1BQ07699 MIR3672-201ENST00000584290 82 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
SCN1BQ07699 TCL6_2.1-201ENST00000615162 119 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 SCARNA15.3-201ENST00000626315 122 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 SCARNA4.1-201ENST00000628597 123 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN1BQ07699 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SCN1BQ07699 SNORD50.1-201ENST00000362987 71 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 Y_RNA.135-201ENST00000363439 95 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 Y_RNA.212-201ENST00000364177 102 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 MIR300-201ENST00000401138 83 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 SNORA11.4-201ENST00000408823 129 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN1BQ07699 AL513185.2-201ENST00000425543 193 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN1BQ07699 RPL23AP75-201ENST00000491601 451 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN1BQ07699 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN1BQ07699 MIR3162-201ENST00000581818 82 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 MIR4753-201ENST00000585119 83 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 POLR3GP2-201ENST00000588366 668 ntBASIC1.83□□□□□ -2.12
SCN1BQ07699 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN1BQ07699 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN1BQ07699 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
SCN1BQ07699 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SCN1BQ07699 AL356292.1-201ENST00000283110 373 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 RNU6-1215P-201ENST00000384441 102 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 RPL21P111-201ENST00000418453 477 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AL358453.1-201ENST00000422522 250 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN1BQ07699 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.82□□□□□ -2.12
SCN1BQ07699 DAP3P1-201ENST00000441522 278 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AL357134.1-201ENST00000445848 426 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 ATP5J2P3-201ENST00000451550 258 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN1BQ07699 AC079354.2-201ENST00000453523 154 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 MTCO2P30-201ENST00000503662 364 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN1BQ07699 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN1BQ07699 MIR3942-201ENST00000585264 109 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN1BQ07699 SCARNA4-201ENST00000629045 128 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 IGHVIII-44-202ENST00000636235 289 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 AC100810.6-201ENST00000638068 285 ntBASIC1.82□□□□□ -2.12
SCN1BQ07699 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN1BQ07699 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SCN1BQ07699 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SCN1BQ07699 RNU6-534P-201ENST00000364877 106 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 Y_RNA.295-201ENST00000364918 102 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SCN1BQ07699 RNU4-53P-201ENST00000410828 140 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 AL139415.2-201ENST00000431968 163 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 AC009237.7-201ENST00000447357 229 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 RNU6-856P-201ENST00000516959 98 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 RNU6-1314P-201ENST00000517139 104 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 MTND1P5-201ENST00000517906 940 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN1BQ07699 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN1BQ07699 RRN3P3-201ENST00000549207 578 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN1BQ07699 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 AC009033.1-201ENST00000624279 431 ntBASIC1.81□□□□□ -2.12
SCN1BQ07699 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN1BQ07699 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
SCN1BQ07699 RNU6-862P-201ENST00000362804 105 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SCN1BQ07699 RNU6-306P-201ENST00000384617 107 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 Y_RNA.573-201ENST00000384763 105 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 SNORD115-47-201ENST00000391226 86 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN1BQ07699 AC099677.2-201ENST00000436385 175 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN1BQ07699 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN1BQ07699 AC016717.1-201ENST00000448918 286 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 HMGN2P23-201ENST00000456759 269 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC007215.1-201ENST00000464893 276 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN1BQ07699 ACA59.1-201ENST00000515966 143 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 RNU6-1041P-201ENST00000516254 102 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN1BQ07699 SNRPGP20-201ENST00000604477 205 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC116312.1-201ENST00000606841 314 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC019193.3-201ENST00000609144 554 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 U4.5-201ENST00000617137 123 ntBASIC1.8□□□□□ -2.12
SCN1BQ07699 AC137590.2-201ENST00000619709 240 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms