Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.18□□□□□ -1.9
IRF9Q00978 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.18□□□□□ -1.9
IRF9Q00978 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 DEFB131C-201ENST00000528817 165 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
IRF9Q00978 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.18□□□□□ -1.9
IRF9Q00978 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.18□□□□□ -1.9
IRF9Q00978 AC008739.2-201ENST00000597006 317 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.18□□□□□ -1.9
IRF9Q00978 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.18□□□□□ -1.9
IRF9Q00978 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IRF9Q00978 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IRF9Q00978 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
IRF9Q00978 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
IRF9Q00978 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
IRF9Q00978 SNORD27-201ENST00000363981 72 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 SNORA18.2-201ENST00000383865 132 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 RNU6-1026P-201ENST00000384465 108 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
IRF9Q00978 SNORA12-201ENST00000391162 147 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 AC004866.1-201ENST00000411748 78 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 RAB28P5-201ENST00000427490 651 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
IRF9Q00978 SERF1AP1-201ENST00000514575 187 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 HSPE1P18-201ENST00000517602 280 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.17□□□□□ -1.9
IRF9Q00978 AC010900.2-201ENST00000604508 210 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
IRF9Q00978 AC092628.2-201ENST00000622492 339 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.17□□□□□ -1.9
IRF9Q00978 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
IRF9Q00978 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IRF9Q00978 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IRF9Q00978 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IRF9Q00978 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
IRF9Q00978 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 Y_RNA.415-201ENST00000384012 112 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 Y_RNA.498-201ENST00000384460 102 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
IRF9Q00978 SNORA53-201ENST00000391141 249 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AL033519.2-201ENST00000403958 392 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AL603910.2-201ENST00000407268 136 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 ELOCP21-201ENST00000412558 336 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.16□□□□□ -1.9
IRF9Q00978 AC009237.7-201ENST00000447357 229 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AC008155.2-201ENST00000464337 397 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AC140059.1-201ENST00000489238 361 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 RNU6-344P-201ENST00000516635 111 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 RNU6-111P-201ENST00000517179 105 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.16□□□□□ -1.9
IRF9Q00978 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.16□□□□□ -1.9
IRF9Q00978 MIR5006-201ENST00000583027 110 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.16□□□□□ -1.9
IRF9Q00978 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.16□□□□□ -1.9
IRF9Q00978 SNORD11B-201ENST00000607707 90 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.16□□□□□ -1.9
IRF9Q00978 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IRF9Q00978 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
IRF9Q00978 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.15□□□□□ -1.9
IRF9Q00978 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.15□□□□□ -1.9
IRF9Q00978 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.15□□□□□ -1.9
IRF9Q00978 SNORA72.2-201ENST00000365028 127 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 Y_RNA.333-201ENST00000365274 102 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
IRF9Q00978 Y_RNA.515-201ENST00000384535 112 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.15□□□□□ -1.91
IRF9Q00978 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 RPL27AP5-201ENST00000469428 449 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 RN7SL293P-201ENST00000481765 281 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 HMGB3P17-201ENST00000504195 649 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 SEM1P1-201ENST00000506694 209 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.15□□□□□ -1.91
IRF9Q00978 AC037487.3-201ENST00000606668 112 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 U2.14-201ENST00000615943 113 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
IRF9Q00978 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.15□□□□□ -1.91
IRF9Q00978 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IRF9Q00978 AC103988.1-201ENST00000566382 2177 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IRF9Q00978 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IRF9Q00978 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.91
IRF9Q00978 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
IRF9Q00978 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IRF9Q00978 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IRF9Q00978 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IRF9Q00978 Y_RNA.54-201ENST00000362766 105 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 RNU6-1266P-201ENST00000362794 105 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 SNORD32B-201ENST00000364460 84 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 Y_RNA.331-201ENST00000365267 102 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IRF9Q00978 Y_RNA.539-201ENST00000384635 107 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms