Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC099654.7-201ENST00000635788 2127 ntBASIC3.92□□□□□ -1.78
USP11P51784 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP11P51784 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP11P51784 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.92□□□□□ -1.78
USP11P51784 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
USP11P51784 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP11P51784 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.91□□□□□ -1.78
USP11P51784 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.91□□□□□ -1.78
USP11P51784 RNU6-801P-201ENST00000364087 105 ntBASIC3.91□□□□□ -1.78
USP11P51784 RNU6-793P-201ENST00000384233 104 ntBASIC3.91□□□□□ -1.78
USP11P51784 YPEL5P1-201ENST00000419731 367 ntBASIC3.91□□□□□ -1.78
USP11P51784 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.91□□□□□ -1.78
USP11P51784 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.91□□□□□ -1.78
USP11P51784 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
USP11P51784 RNU6-1333P-201ENST00000516162 93 ntBASIC3.91□□□□□ -1.78
USP11P51784 RNU6-436P-201ENST00000516171 114 ntBASIC3.91□□□□□ -1.78
USP11P51784 RNU6-581P-201ENST00000516214 105 ntBASIC3.91□□□□□ -1.78
USP11P51784 CKS1BP7-201ENST00000522230 235 ntBASIC3.91□□□□□ -1.78
USP11P51784 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.91□□□□□ -1.78
USP11P51784 AC007179.3-201ENST00000604976 235 ntBASIC3.91□□□□□ -1.78
USP11P51784 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP11P51784 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
USP11P51784 U6.105-201ENST00000637379 88 ntBASIC3.91□□□□□ -1.78
USP11P51784 CUL1P1-201ENST00000509510 2425 ntBASIC3.9□□□□□ -1.78
USP11P51784 RNU6-727P-201ENST00000363592 107 ntBASIC3.9□□□□□ -1.79
USP11P51784 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.9□□□□□ -1.79
USP11P51784 SNORA20-201ENST00000384662 132 ntBASIC3.9□□□□□ -1.79
USP11P51784 MIR490-201ENST00000384865 128 ntBASIC3.9□□□□□ -1.79
USP11P51784 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.9□□□□□ -1.79
USP11P51784 NDUFB4P6-201ENST00000436819 366 ntBASIC3.9□□□□□ -1.79
USP11P51784 CYCSP35-201ENST00000451978 304 ntBASIC3.9□□□□□ -1.79
USP11P51784 RPS29P20-201ENST00000489592 171 ntBASIC3.9□□□□□ -1.79
USP11P51784 RPS27AP10-201ENST00000496103 208 ntBASIC3.9□□□□□ -1.79
USP11P51784 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.9□□□□□ -1.79
USP11P51784 FCF1P8-201ENST00000510322 597 ntBASIC3.9□□□□□ -1.79
USP11P51784 Y_RNA.797-201ENST00000515977 94 ntBASIC3.9□□□□□ -1.79
USP11P51784 RNU6-1234P-201ENST00000516877 103 ntBASIC3.9□□□□□ -1.79
USP11P51784 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.9□□□□□ -1.79
USP11P51784 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.9□□□□□ -1.79
USP11P51784 MIR3658-201ENST00000636291 56 ntBASIC3.9□□□□□ -1.79
USP11P51784 MIR3674-201ENST00000636576 68 ntBASIC3.9□□□□□ -1.79
USP11P51784 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.79
USP11P51784 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP11P51784 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.9□□□□□ -1.79
USP11P51784 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP11P51784 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP11P51784 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
USP11P51784 RNU6-525P-201ENST00000363685 104 ntBASIC3.89□□□□□ -1.79
USP11P51784 RNU6-454P-201ENST00000364292 107 ntBASIC3.89□□□□□ -1.79
USP11P51784 snoU2_19.4-201ENST00000364329 80 ntBASIC3.89□□□□□ -1.79
USP11P51784 RNU4-11P-201ENST00000365287 132 ntBASIC3.89□□□□□ -1.79
USP11P51784 AC096649.2-201ENST00000416186 393 ntBASIC3.89□□□□□ -1.79
USP11P51784 EBAG9P1-201ENST00000418955 543 ntBASIC3.89□□□□□ -1.79
USP11P51784 RPL39P29-201ENST00000447779 157 ntBASIC3.89□□□□□ -1.79
USP11P51784 RPL37P4-201ENST00000448908 268 ntBASIC3.89□□□□□ -1.79
USP11P51784 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.89□□□□□ -1.79
USP11P51784 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.89□□□□□ -1.79
USP11P51784 SNORA25.12-201ENST00000516202 82 ntBASIC3.89□□□□□ -1.79
USP11P51784 RNU6-919P-201ENST00000516731 104 ntBASIC3.89□□□□□ -1.79
USP11P51784 RNU2-12P-201ENST00000517216 168 ntBASIC3.89□□□□□ -1.79
USP11P51784 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.89□□□□□ -1.79
USP11P51784 AC021269.2-201ENST00000532318 330 ntBASIC3.89□□□□□ -1.79
USP11P51784 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.89□□□□□ -1.79
USP11P51784 AC022616.8-201ENST00000533569 253 ntBASIC3.89□□□□□ -1.79
USP11P51784 AC009163.5-201ENST00000575421 637 ntBASIC3.89□□□□□ -1.79
USP11P51784 MIR4431-201ENST00000579990 94 ntBASIC3.89□□□□□ -1.79
USP11P51784 RMST_8.1-201ENST00000610287 165 ntBASIC3.89□□□□□ -1.79
USP11P51784 MIR7975-201ENST00000619350 68 ntBASIC3.89□□□□□ -1.79
USP11P51784 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP11P51784 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
USP11P51784 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP11P51784 AL672296.1-201ENST00000427780 2158 ntBASIC3.89□□□□□ -1.79
USP11P51784 ADAM3A-203ENST00000461344 2157 ntBASIC3.89□□□□□ -1.79
USP11P51784 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
USP11P51784 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP11P51784 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP11P51784 RNU1-33P-201ENST00000364249 162 ntBASIC3.88□□□□□ -1.79
USP11P51784 RNU6-1280P-201ENST00000365211 107 ntBASIC3.88□□□□□ -1.79
USP11P51784 RNU6-1310P-201ENST00000384153 107 ntBASIC3.88□□□□□ -1.79
USP11P51784 RNU6-622P-201ENST00000384272 103 ntBASIC3.88□□□□□ -1.79
USP11P51784 MIR34B-201ENST00000385076 84 ntBASIC3.88□□□□□ -1.79
USP11P51784 RNU6-578P-201ENST00000390980 103 ntBASIC3.88□□□□□ -1.79
USP11P51784 RNU6-1248P-201ENST00000391096 64 ntBASIC3.88□□□□□ -1.79
USP11P51784 AC019205.3-201ENST00000424573 156 ntBASIC3.88□□□□□ -1.79
USP11P51784 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.88□□□□□ -1.79
USP11P51784 RPS20P10-201ENST00000451209 253 ntBASIC3.88□□□□□ -1.79
USP11P51784 AC093663.1-201ENST00000497190 394 ntBASIC3.88□□□□□ -1.79
USP11P51784 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.88□□□□□ -1.79
USP11P51784 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.88□□□□□ -1.79
USP11P51784 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.88□□□□□ -1.79
USP11P51784 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.88□□□□□ -1.79
USP11P51784 AC009127.3-201ENST00000570531 403 ntBASIC3.88□□□□□ -1.79
USP11P51784 MIR4425-201ENST00000580572 84 ntBASIC3.88□□□□□ -1.79
USP11P51784 AL359881.1-201ENST00000602916 267 ntBASIC3.88□□□□□ -1.79
USP11P51784 AC099778.2-201ENST00000610904 211 ntBASIC3.88□□□□□ -1.79
USP11P51784 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.88□□□□□ -1.79
USP11P51784 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
USP11P51784 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms