Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCN1P35523 RNA5SP76-201ENST00000516277 87 ntBASIC4.64□□□□□ -1.67
CLCN1P35523 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.64□□□□□ -1.67
CLCN1P35523 AC090142.3-201ENST00000519012 385 ntBASIC4.64□□□□□ -1.67
CLCN1P35523 PARP1P2-201ENST00000556806 195 ntBASIC4.64□□□□□ -1.67
CLCN1P35523 AC127455.1-201ENST00000565496 145 ntBASIC4.64□□□□□ -1.67
CLCN1P35523 AC006111.3-201ENST00000622137 383 ntBASIC4.64□□□□□ -1.67
CLCN1P35523 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCN1P35523 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCN1P35523 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCN1P35523 AL159152.1-201ENST00000635019 2587 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
CLCN1P35523 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN1P35523 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CLCN1P35523 RNY1P11-201ENST00000363759 113 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 RNU6-271P-201ENST00000363858 105 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 Y_RNA.563-201ENST00000384707 108 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 MIR29B2-201ENST00000385055 81 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 SNORA11F-201ENST00000408237 128 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 CYCSP49-201ENST00000420810 319 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 AC010154.1-201ENST00000425857 269 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 HMGN2P31-201ENST00000432430 273 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN1P35523 RPL23AP54-201ENST00000495129 419 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN1P35523 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 AC090049.2-201ENST00000550377 109 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.63□□□□□ -1.67
CLCN1P35523 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN1P35523 MIR4284-201ENST00000578924 81 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 MIR5047-201ENST00000579212 100 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 MIR4753-201ENST00000585119 83 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 RPL30P11-203ENST00000598995 310 ntBASIC4.63□□□□□ -1.67
CLCN1P35523 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CLCN1P35523 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN1P35523 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN1P35523 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CLCN1P35523 CENPCP1-201ENST00000533085 2578 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCN1P35523 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCN1P35523 Y_RNA.251-201ENST00000364551 99 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 AC068538.1-201ENST00000376856 336 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 MIR300-201ENST00000401138 83 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 MIR1283-1-201ENST00000408494 87 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 RNU6-1064P-201ENST00000410626 104 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCN1P35523 EIF4EP4-201ENST00000424916 578 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 RNU7-14P-201ENST00000459331 62 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 AC091153.1-201ENST00000466297 402 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 YWHAEP4-201ENST00000505390 198 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 IGLVIV-65-201ENST00000517313 360 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN1P35523 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN1P35523 MIR4715-201ENST00000584117 79 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 uc_338.13-201ENST00000618243 179 ntBASIC4.62□□□□□ -1.67
CLCN1P35523 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCN1P35523 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCN1P35523 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCN1P35523 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCN1P35523 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLCN1P35523 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCN1P35523 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
CLCN1P35523 SNORA27.1-201ENST00000362604 124 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 RNU6-1323P-201ENST00000384025 107 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 SNORD14D-201ENST00000384390 87 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 Y_RNA.525-201ENST00000384570 113 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 RPL23AP52-201ENST00000439311 478 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 RPS29P31-201ENST00000446147 164 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCN1P35523 RPS26P55-201ENST00000471178 356 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 RNU7-116P-201ENST00000516940 62 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 AC006064.5-201ENST00000541782 248 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCN1P35523 AC113403.1-201ENST00000604910 193 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 AC112484.5-201ENST00000624189 228 ntBASIC4.61□□□□□ -1.67
CLCN1P35523 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CLCN1P35523 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCN1P35523 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCN1P35523 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCN1P35523 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCN1P35523 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCN1P35523 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCN1P35523 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCN1P35523 SNORA63.4-201ENST00000362763 126 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 RNA5SP175-201ENST00000364275 119 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 SNORA70.2-201ENST00000364506 135 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 RNU6-1082P-201ENST00000364574 107 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 Y_RNA.584-201ENST00000391090 114 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 Y_RNA.587-201ENST00000391210 103 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 AL512604.1-201ENST00000404812 257 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 RNU6-437P-201ENST00000459408 95 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 AC026726.1-201ENST00000512859 601 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 MIR449C-201ENST00000516047 92 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 RNA5SP309-201ENST00000516670 106 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 AC027419.1-201ENST00000522976 328 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 MIR378D2-201ENST00000580636 98 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 AC120024.3-201ENST00000603167 156 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 AC005972.2-201ENST00000604690 348 ntBASIC4.6□□□□□ -1.67
CLCN1P35523 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms