Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 AL391813.1-201ENST00000603098 260 ntBASIC3.16□□□□□ -1.9
TNFRSF1AP19438 AL078604.3-201ENST00000615580 211 ntBASIC3.16□□□□□ -1.9
TNFRSF1AP19438 SCARNA4-202ENST00000625402 129 ntBASIC3.16□□□□□ -1.9
TNFRSF1AP19438 AP000553.6-201ENST00000641242 118 ntBASIC3.16□□□□□ -1.9
TNFRSF1AP19438 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
TNFRSF1AP19438 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1AP19438 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TNFRSF1AP19438 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 AC008555.8-201ENST00000623602 2168 ntBASIC3.15□□□□□ -1.9
TNFRSF1AP19438 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 AC134026.1-201ENST00000623249 2239 ntBASIC3.15□□□□□ -1.9
TNFRSF1AP19438 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.15□□□□□ -1.9
TNFRSF1AP19438 MIR450A1-201ENST00000362262 91 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.116-201ENST00000363292 103 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 RNU6-527P-201ENST00000363425 104 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 RNU6-873P-201ENST00000363833 107 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.329-201ENST00000365209 107 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 MIR200C-201ENST00000384980 68 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 MIR134-201ENST00000385258 73 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 RNU6-588P-201ENST00000410281 105 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 RNU2-54P-201ENST00000410299 190 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AL135790.2-201ENST00000437701 267 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AL133547.1-201ENST00000448546 220 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.651-201ENST00000459380 103 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 TRBV12-2-201ENST00000489763 344 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AL138963.2-201ENST00000605137 226 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AC010999.1-201ENST00000611856 324 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AC013791.1-201ENST00000616619 62 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 MIR6844-201ENST00000637122 62 ntBASIC3.15□□□□□ -1.91
TNFRSF1AP19438 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TNFRSF1AP19438 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFRSF1AP19438 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TNFRSF1AP19438 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TNFRSF1AP19438 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.35-201ENST00000362601 101 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RNU6-801P-201ENST00000364087 105 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 AL359837.1-201ENST00000381357 287 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RNU1-89P-201ENST00000384592 164 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 SNORA8.3-201ENST00000384679 139 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 SNORA26.5-201ENST00000391215 123 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RPL26P27-201ENST00000414397 437 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 AL445584.1-201ENST00000431451 330 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 AC243964.1-201ENST00000441814 261 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 AL121914.1-201ENST00000450188 156 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RN7SL542P-201ENST00000467147 294 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RPS29P24-201ENST00000486345 171 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RN7SKP18-201ENST00000516005 275 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.677-201ENST00000516401 85 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 RNU6-537P-201ENST00000517277 103 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 U7.8-201ENST00000619968 63 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 CR392039.5-201ENST00000623201 510 ntBASIC3.14□□□□□ -1.91
TNFRSF1AP19438 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1AP19438 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.24-201ENST00000362508 103 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 SNORD32A-201ENST00000364805 84 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.293-201ENST00000364908 93 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.388-201ENST00000383919 113 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RNU6-245P-201ENST00000384020 107 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 MIR15B-201ENST00000385045 98 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 MIR616-201ENST00000385293 97 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RNY4P29-201ENST00000410801 97 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AC009963.1-201ENST00000417265 157 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AL358075.3-201ENST00000426289 226 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RPL23AP95-201ENST00000426806 265 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 HSPE1P13-201ENST00000451143 297 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AC245047.8-201ENST00000456455 284 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 SNORD105B-201ENST00000458770 79 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RNA5SP208-201ENST00000516156 78 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 SNORA43.2-201ENST00000516652 128 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RNU6-1198P-201ENST00000516904 67 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AC034105.4-201ENST00000568304 277 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AL670379.3-201ENST00000605040 251 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 AC073308.1-201ENST00000623696 305 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 284.4 ms