Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 DEFB109C-201ENST00000382575 264 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 DEFB109B-201ENST00000382656 264 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AC019129.1-201ENST00000403786 261 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AP000567.1-201ENST00000406413 156 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 RNU6-174P-201ENST00000410406 106 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.3□□□□□ -2.04
COL2A1P02458 UBE2V1P4-201ENST00000425374 344 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 HMGB1P27-201ENST00000431429 603 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AL133396.1-201ENST00000432048 687 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 RNU6-953P-201ENST00000459154 107 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AC022493.1-201ENST00000492984 337 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.3□□□□□ -2.04
COL2A1P02458 TRMT112P2-201ENST00000512910 132 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 SNORA25.11-201ENST00000515935 105 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 RNU2-53P-201ENST00000516257 147 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 RN7SKP258-201ENST00000517151 304 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.3□□□□□ -2.04
COL2A1P02458 TRAV32-201ENST00000553993 340 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 MIR5089-201ENST00000580047 84 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 MIR5692A1-201ENST00000580523 69 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 AC012433.1-201ENST00000588916 398 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 U2.22-201ENST00000636441 106 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
COL2A1P02458 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.29□□□□□ -2.04
COL2A1P02458 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 SNORA31-201ENST00000362607 130 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 RNU6-338P-201ENST00000383888 105 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 Y_RNA.471-201ENST00000384312 102 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 MIR548I3-201ENST00000408378 149 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 MIR548I1-201ENST00000408810 149 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 RNU6-121P-201ENST00000410525 99 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.29□□□□□ -2.04
COL2A1P02458 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.29□□□□□ -2.04
COL2A1P02458 AL591704.1-201ENST00000432574 275 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.29□□□□□ -2.04
COL2A1P02458 RPL26P6-201ENST00000440913 438 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.29□□□□□ -2.04
COL2A1P02458 RPL9P9-202ENST00000466501 579 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC140059.1-201ENST00000489238 361 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 RNU6-307P-201ENST00000516743 106 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 SNORA40.15-201ENST00000516884 107 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.29□□□□□ -2.04
COL2A1P02458 AL355812.1-201ENST00000603215 216 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.29□□□□□ -2.04
COL2A1P02458 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AL159153.1-201ENST00000619688 317 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC090617.7-201ENST00000623952 126 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC008669.1-201ENST00000565823 2178 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC011978.2-201ENST00000569835 2054 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AC090740.1-201ENST00000623193 2262 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 AL353746.1-201ENST00000566293 6881 ntBASIC2.29□□□□□ -2.04
COL2A1P02458 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL2A1P02458 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL2A1P02458 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL2A1P02458 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COL2A1P02458 Y_RNA.54-201ENST00000362766 105 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 RNU6-1074P-201ENST00000383995 104 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 RNU6-629P-201ENST00000384061 103 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 Y_RNA.577-201ENST00000384794 101 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 MIR9-3-201ENST00000385084 90 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COL2A1P02458 RNA5SP494-201ENST00000410653 129 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 RNU6-130P-201ENST00000411112 103 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 UBE2D3P2-201ENST00000424409 445 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 MTND3P9-201ENST00000429526 346 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 LINC01399-202ENST00000458450 244 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 snoU109.2-201ENST00000459316 135 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 ACA59.1-201ENST00000515966 143 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.28□□□□□ -2.04
COL2A1P02458 AP003733.2-201ENST00000529409 171 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 AC103996.1-201ENST00000555468 102 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 AC103810.1-201ENST00000579873 453 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 AC009314.1-201ENST00000603871 304 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 Z98751.3-201ENST00000604447 521 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 SDR42E1P4-201ENST00000620894 481 ntBASIC2.28□□□□□ -2.04
COL2A1P02458 Y_RNA.150-201ENST00000363562 102 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 Y_RNA.224-201ENST00000364308 111 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNA5SP189-201ENST00000364920 115 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNU6-827P-201ENST00000365553 106 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 Y_RNA.462-201ENST00000384268 102 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNU6-933P-201ENST00000384424 107 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNU6-882P-201ENST00000391025 103 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNU6-1093P-201ENST00000391194 107 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 AL513475.1-201ENST00000406602 315 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 PRELID3BP1-201ENST00000457142 540 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNU7-87P-201ENST00000459343 62 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RPS15AP34-201ENST00000487776 387 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.27□□□□□ -2.05
COL2A1P02458 RNU6-138P-201ENST00000515952 107 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 SNORA31.15-201ENST00000516771 132 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 RNA5SP480-201ENST00000516840 109 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.27□□□□□ -2.05
COL2A1P02458 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.27□□□□□ -2.05
COL2A1P02458 PRELID2P1-201ENST00000552837 301 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 MIR548AC-201ENST00000585049 88 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 AC174048.1-201ENST00000603389 144 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 AC004805.2-201ENST00000605382 482 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms