Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
DDX58O95786 RNU6-1159P-201ENST00000362933 107 ntBASIC2.41□□□□□ -2.02
DDX58O95786 Y_RNA.135-201ENST00000363439 95 ntBASIC2.41□□□□□ -2.02
DDX58O95786 RNU6-968P-201ENST00000384076 107 ntBASIC2.41□□□□□ -2.02
DDX58O95786 SNORD14D-201ENST00000384390 87 ntBASIC2.41□□□□□ -2.02
DDX58O95786 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX58O95786 AC012306.1-201ENST00000423267 114 ntBASIC2.41□□□□□ -2.02
DDX58O95786 MTND1P2-201ENST00000430604 821 ntBASIC2.41□□□□□ -2.02
DDX58O95786 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
DDX58O95786 IPO7P1-201ENST00000442031 636 ntBASIC2.41□□□□□ -2.02
DDX58O95786 HMGN2P23-201ENST00000456759 269 ntBASIC2.41□□□□□ -2.02
DDX58O95786 AC093259.1-201ENST00000509755 300 ntBASIC2.41□□□□□ -2.02
DDX58O95786 RNU6-1088P-201ENST00000516850 104 ntBASIC2.41□□□□□ -2.02
DDX58O95786 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX58O95786 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX58O95786 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.41□□□□□ -2.02
DDX58O95786 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
DDX58O95786 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
DDX58O95786 AC245060.5-201ENST00000610778 3293 ntBASIC2.4□□□□□ -2.02
DDX58O95786 CBX3P1-201ENST00000325243 554 ntBASIC2.4□□□□□ -2.03
DDX58O95786 RNU6-306P-201ENST00000384617 107 ntBASIC2.4□□□□□ -2.03
DDX58O95786 SNORA26.3-201ENST00000391119 136 ntBASIC2.4□□□□□ -2.03
DDX58O95786 SNORA40.18-201ENST00000391200 128 ntBASIC2.4□□□□□ -2.03
DDX58O95786 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AL355497.1-201ENST00000406262 551 ntBASIC2.4□□□□□ -2.03
DDX58O95786 RNA5SP494-201ENST00000410653 129 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AL139396.1-201ENST00000421137 167 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX58O95786 RNU6-717P-201ENST00000459076 104 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AC055731.1-201ENST00000474387 401 ntBASIC2.4□□□□□ -2.03
DDX58O95786 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.4□□□□□ -2.03
DDX58O95786 ACA59.1-201ENST00000515966 143 ntBASIC2.4□□□□□ -2.03
DDX58O95786 Y_RNA.682-201ENST00000516457 100 ntBASIC2.4□□□□□ -2.03
DDX58O95786 RNU6-566P-201ENST00000516790 107 ntBASIC2.4□□□□□ -2.03
DDX58O95786 RNA5SP454-201ENST00000517231 127 ntBASIC2.4□□□□□ -2.03
DDX58O95786 MRPS36P4-201ENST00000534436 298 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX58O95786 MIR4790-201ENST00000577799 79 ntBASIC2.4□□□□□ -2.03
DDX58O95786 MIR4287-201ENST00000579398 78 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX58O95786 AC124303.1-201ENST00000605703 360 ntBASIC2.4□□□□□ -2.03
DDX58O95786 PCGEM1.1-201ENST00000613431 131 ntBASIC2.4□□□□□ -2.03
DDX58O95786 AL450472.1-202ENST00000637286 180 ntBASIC2.4□□□□□ -2.03
DDX58O95786 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX58O95786 Y_RNA.160-201ENST00000363677 92 ntBASIC2.39□□□□□ -2.03
DDX58O95786 SNORA29-201ENST00000384183 140 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNU6-378P-201ENST00000384324 107 ntBASIC2.39□□□□□ -2.03
DDX58O95786 MIR518A2-201ENST00000384966 87 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNU6-1093P-201ENST00000391194 107 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNU2-20P-201ENST00000410425 191 ntBASIC2.39□□□□□ -2.03
DDX58O95786 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX58O95786 snoU13.6-201ENST00000458785 104 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNU6-329P-201ENST00000459618 107 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RPL31P58-201ENST00000469001 379 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNU6-548P-201ENST00000517083 115 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNA5SP490-201ENST00000517141 136 ntBASIC2.39□□□□□ -2.03
DDX58O95786 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
DDX58O95786 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX58O95786 EIF4A1P12-201ENST00000551910 141 ntBASIC2.39□□□□□ -2.03
DDX58O95786 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX58O95786 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.39□□□□□ -2.03
DDX58O95786 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
DDX58O95786 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.39□□□□□ -2.03
DDX58O95786 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
DDX58O95786 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX58O95786 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
DDX58O95786 Y_RNA.72-201ENST00000362894 103 ntBASIC2.38□□□□□ -2.03
DDX58O95786 SNORD32B-201ENST00000364460 84 ntBASIC2.38□□□□□ -2.03
DDX58O95786 Y_RNA.301-201ENST00000364990 103 ntBASIC2.38□□□□□ -2.03
DDX58O95786 RNU6-234P-201ENST00000365229 104 ntBASIC2.38□□□□□ -2.03
DDX58O95786 RNU6-438P-201ENST00000365561 103 ntBASIC2.38□□□□□ -2.03
DDX58O95786 MIR1262-201ENST00000408276 93 ntBASIC2.38□□□□□ -2.03
DDX58O95786 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX58O95786 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX58O95786 AC005741.1-201ENST00000511094 432 ntBASIC2.38□□□□□ -2.03
DDX58O95786 AC107393.1-201ENST00000512403 346 ntBASIC2.38□□□□□ -2.03
DDX58O95786 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX58O95786 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX58O95786 AP005639.2-201ENST00000527592 928 ntBASIC2.38□□□□□ -2.03
DDX58O95786 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.38□□□□□ -2.03
DDX58O95786 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX58O95786 AC090517.1-201ENST00000569307 266 ntBASIC2.38□□□□□ -2.03
DDX58O95786 AC005668.1-201ENST00000571142 476 ntBASIC2.38□□□□□ -2.03
DDX58O95786 MIR4742-201ENST00000581069 85 ntBASIC2.38□□□□□ -2.03
DDX58O95786 FGF7P1-201ENST00000582820 288 ntBASIC2.38□□□□□ -2.03
DDX58O95786 MIR6128-201ENST00000615528 109 ntBASIC2.38□□□□□ -2.03
DDX58O95786 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
DDX58O95786 RNU6-1286P-201ENST00000383871 107 ntBASIC2.37□□□□□ -2.03
DDX58O95786 RNU6-482P-201ENST00000391068 107 ntBASIC2.37□□□□□ -2.03
DDX58O95786 RNU11-3P-201ENST00000391111 133 ntBASIC2.37□□□□□ -2.03
DDX58O95786 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX58O95786 RNA5SP201-201ENST00000410316 124 ntBASIC2.37□□□□□ -2.03
DDX58O95786 MTND3P8-201ENST00000412909 339 ntBASIC2.37□□□□□ -2.03
DDX58O95786 MTND1P23-201ENST00000416931 372 ntBASIC2.37□□□□□ -2.03
DDX58O95786 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX58O95786 AC079804.2-201ENST00000490376 200 ntBASIC2.37□□□□□ -2.03
DDX58O95786 MTCO2P30-201ENST00000503662 364 ntBASIC2.37□□□□□ -2.03
DDX58O95786 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.37□□□□□ -2.03
DDX58O95786 RNU5F-4P-201ENST00000516581 114 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms