Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MTCO2P6-201ENST00000463134 685 ntBASIC0.87□□□□□ -2.27
VAPBO95292 MTND2P14-201ENST00000482139 351 ntBASIC0.87□□□□□ -2.27
VAPBO95292 AC010486.2-201ENST00000505572 483 ntBASIC0.87□□□□□ -2.27
VAPBO95292 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.87□□□□□ -2.27
VAPBO95292 FABP5P5-201ENST00000515537 406 ntBASIC0.87□□□□□ -2.27
VAPBO95292 SNORA70.22-201ENST00000517160 124 ntBASIC0.87□□□□□ -2.27
VAPBO95292 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.87□□□□□ -2.27
VAPBO95292 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.87□□□□□ -2.27
VAPBO95292 MIR4775-201ENST00000581168 75 ntBASIC0.87□□□□□ -2.27
VAPBO95292 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
VAPBO95292 BNIP3P10-201ENST00000605360 577 ntBASIC0.87□□□□□ -2.27
VAPBO95292 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.87□□□□□ -2.27
VAPBO95292 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.87□□□□□ -2.27
VAPBO95292 AL133216.2-202ENST00000634512 349 ntBASIC0.87□□□□□ -2.27
VAPBO95292 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.87□□□□□ -2.27
VAPBO95292 RNU6-534P-201ENST00000364877 106 ntBASIC0.86□□□□□ -2.27
VAPBO95292 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
VAPBO95292 RNU6-1106P-201ENST00000390845 107 ntBASIC0.86□□□□□ -2.27
VAPBO95292 SNORD70.1-201ENST00000391007 85 ntBASIC0.86□□□□□ -2.27
VAPBO95292 RNU6-321P-201ENST00000410912 106 ntBASIC0.86□□□□□ -2.27
VAPBO95292 HSFY7P-201ENST00000432672 318 ntBASIC0.86□□□□□ -2.27
VAPBO95292 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.86□□□□□ -2.27
VAPBO95292 HSFY8P-201ENST00000437934 318 ntBASIC0.86□□□□□ -2.27
VAPBO95292 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.86□□□□□ -2.27
VAPBO95292 RPS29P15-201ENST00000458329 171 ntBASIC0.86□□□□□ -2.27
VAPBO95292 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
VAPBO95292 RNU6-1053P-201ENST00000515930 101 ntBASIC0.86□□□□□ -2.27
VAPBO95292 RNU6-948P-201ENST00000516374 107 ntBASIC0.86□□□□□ -2.27
VAPBO95292 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.86□□□□□ -2.27
VAPBO95292 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.86□□□□□ -2.27
VAPBO95292 AC002044.1-201ENST00000606707 158 ntBASIC0.86□□□□□ -2.27
VAPBO95292 AC022306.3-201ENST00000619930 550 ntBASIC0.86□□□□□ -2.27
VAPBO95292 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.86□□□□□ -2.27
VAPBO95292 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.85□□□□□ -2.27
VAPBO95292 MIR337-201ENST00000362281 93 ntBASIC0.85□□□□□ -2.27
VAPBO95292 snoU2-30.2-201ENST00000362805 70 ntBASIC0.85□□□□□ -2.27
VAPBO95292 RNY1P10-201ENST00000363268 113 ntBASIC0.85□□□□□ -2.27
VAPBO95292 RNA5SP323-201ENST00000391094 133 ntBASIC0.85□□□□□ -2.27
VAPBO95292 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.85□□□□□ -2.27
VAPBO95292 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.85□□□□□ -2.27
VAPBO95292 AC074290.1-201ENST00000448883 135 ntBASIC0.85□□□□□ -2.27
VAPBO95292 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.85□□□□□ -2.27
VAPBO95292 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.85□□□□□ -2.27
VAPBO95292 SNORD27.1-201ENST00000516319 72 ntBASIC0.85□□□□□ -2.27
VAPBO95292 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.85□□□□□ -2.27
VAPBO95292 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
VAPBO95292 MIR3941-201ENST00000582572 103 ntBASIC0.85□□□□□ -2.27
VAPBO95292 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
VAPBO95292 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
VAPBO95292 AC064872.1-201ENST00000604823 1072 ntBASIC0.85□□□□□ -2.27
VAPBO95292 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
VAPBO95292 RNU6-1097P-201ENST00000363586 107 ntBASIC0.84□□□□□ -2.27
VAPBO95292 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
VAPBO95292 RNU6-266P-201ENST00000364225 107 ntBASIC0.84□□□□□ -2.27
VAPBO95292 RNU6-1235P-201ENST00000384559 107 ntBASIC0.84□□□□□ -2.27
VAPBO95292 AP000275.1-201ENST00000411943 390 ntBASIC0.84□□□□□ -2.27
VAPBO95292 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.84□□□□□ -2.27
VAPBO95292 RNU6-498P-201ENST00000459468 107 ntBASIC0.84□□□□□ -2.27
VAPBO95292 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.84□□□□□ -2.27
VAPBO95292 RNU2-69P-201ENST00000516061 100 ntBASIC0.84□□□□□ -2.27
VAPBO95292 RN7SKP265-201ENST00000516448 223 ntBASIC0.84□□□□□ -2.27
VAPBO95292 SNORA25.17-201ENST00000517184 124 ntBASIC0.84□□□□□ -2.27
VAPBO95292 SUMO2P16-201ENST00000519475 264 ntBASIC0.84□□□□□ -2.27
VAPBO95292 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.84□□□□□ -2.27
VAPBO95292 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.84□□□□□ -2.27
VAPBO95292 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
VAPBO95292 MIR4742-201ENST00000581069 85 ntBASIC0.84□□□□□ -2.27
VAPBO95292 MIR98-201ENST00000606724 119 ntBASIC0.84□□□□□ -2.27
VAPBO95292 AC005562.2-201ENST00000618264 111 ntBASIC0.84□□□□□ -2.27
VAPBO95292 SNORA43.4-201ENST00000629559 138 ntBASIC0.84□□□□□ -2.27
VAPBO95292 SNORA33-201ENST00000363664 130 ntBASIC0.83□□□□□ -2.28
VAPBO95292 RNU6-108P-201ENST00000365558 107 ntBASIC0.83□□□□□ -2.28
VAPBO95292 MIR1253-201ENST00000408273 105 ntBASIC0.83□□□□□ -2.28
VAPBO95292 RPS3AP3-201ENST00000411933 242 ntBASIC0.83□□□□□ -2.28
VAPBO95292 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPBO95292 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
VAPBO95292 AC010099.3-201ENST00000423896 409 ntBASIC0.83□□□□□ -2.28
VAPBO95292 ISCA1P6-201ENST00000427740 390 ntBASIC0.83□□□□□ -2.28
VAPBO95292 HMGN2P34-201ENST00000437647 269 ntBASIC0.83□□□□□ -2.28
VAPBO95292 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPBO95292 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPBO95292 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
VAPBO95292 AP003072.2-201ENST00000527756 676 ntBASIC0.83□□□□□ -2.28
VAPBO95292 DEFB131C-201ENST00000528817 165 ntBASIC0.83□□□□□ -2.28
VAPBO95292 AC026470.2-201ENST00000561492 181 ntBASIC0.83□□□□□ -2.28
VAPBO95292 Z84480.1-201ENST00000605131 311 ntBASIC0.83□□□□□ -2.28
VAPBO95292 AC104458.1-201ENST00000608243 463 ntBASIC0.83□□□□□ -2.28
VAPBO95292 AC006566.1-201ENST00000608943 513 ntBASIC0.83□□□□□ -2.28
VAPBO95292 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
VAPBO95292 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VAPBO95292 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
VAPBO95292 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
VAPBO95292 RNU6-74P-201ENST00000384235 107 ntBASIC0.82□□□□□ -2.28
VAPBO95292 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.82□□□□□ -2.28
VAPBO95292 AC022364.2-201ENST00000457963 554 ntBASIC0.82□□□□□ -2.28
VAPBO95292 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.82□□□□□ -2.28
VAPBO95292 SNORA31.4-201ENST00000516049 129 ntBASIC0.82□□□□□ -2.28
VAPBO95292 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
VAPBO95292 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.82□□□□□ -2.28
VAPBO95292 AC024995.1-201ENST00000523014 93 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms