Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC099522.1-202ENST00000514718 367 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 RNU1-95P-201ENST00000516357 160 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 RNA5SP519-201ENST00000516480 119 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 RNU1-128P-201ENST00000516704 160 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.29□□□□□ -1.72
GFRA3O60609 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA3O60609 MIR4305-201ENST00000583252 102 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.29□□□□□ -1.72
GFRA3O60609 ELOCP29-201ENST00000588193 334 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 AL034555.1-201ENST00000604816 211 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.29□□□□□ -1.72
GFRA3O60609 AP005432.1-201ENST00000580891 3485 ntBASIC4.29□□□□□ -1.72
GFRA3O60609 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA3O60609 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA3O60609 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA3O60609 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
GFRA3O60609 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 AP001273.1-201ENST00000624493 3152 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
GFRA3O60609 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 RNA5SP432-201ENST00000362480 116 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 RNU6-117P-201ENST00000365415 107 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 RNU6-1201P-201ENST00000384227 107 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 RNU6-679P-201ENST00000391003 106 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 AC007738.1-201ENST00000413892 348 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 SNORD65B-201ENST00000459126 73 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 AC080013.2-201ENST00000460866 323 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 MRPS17P9-201ENST00000511924 393 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 RN7SKP234-201ENST00000517173 224 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 AC079587.1-201ENST00000603846 277 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 HSPE1P7-201ENST00000604681 321 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 MIR203B-201ENST00000636080 86 ntBASIC4.28□□□□□ -1.72
GFRA3O60609 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GFRA3O60609 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
GFRA3O60609 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
GFRA3O60609 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
GFRA3O60609 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.27□□□□□ -1.73
GFRA3O60609 RNU6-457P-201ENST00000363999 107 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 RNU6-1305P-201ENST00000364353 104 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 RNU6-140P-201ENST00000384566 108 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 MIR181A2-201ENST00000384863 110 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 SNORA48.2-201ENST00000390926 124 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 RPS29P4-201ENST00000414733 161 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 CYCSP48-201ENST00000417124 323 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 AC099336.2-201ENST00000422457 254 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 AC099560.2-201ENST00000457554 255 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 RNA5SP20-201ENST00000515976 84 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 RNU6-693P-201ENST00000516134 107 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 AC004486.1-201ENST00000546846 233 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 AC006349.1-201ENST00000555526 235 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 U3.45-201ENST00000607547 219 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 AL110115.1-201ENST00000614396 364 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 U73479.1-201ENST00000618062 168 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 U6.73-201ENST00000619194 103 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.27□□□□□ -1.73
GFRA3O60609 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
GFRA3O60609 AC018630.2-201ENST00000534866 2403 ntBASIC4.27□□□□□ -1.73
GFRA3O60609 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GFRA3O60609 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.27□□□□□ -1.73
GFRA3O60609 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
GFRA3O60609 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA3O60609 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA3O60609 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA3O60609 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA3O60609 CPHL1P-201ENST00000461341 3407 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.26□□□□□ -1.73
GFRA3O60609 AC002543.1-201ENST00000299783 1954 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RNU1-14P-201ENST00000362759 152 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RNU1-73P-201ENST00000383971 164 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 AL139095.1-201ENST00000404326 391 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 AC092047.1-201ENST00000424997 240 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RN7SL429P-201ENST00000479090 223 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RN7SL489P-201ENST00000486185 223 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RN7SL327P-201ENST00000488659 223 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 AC010598.1-201ENST00000510378 103 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 AC093729.1-201ENST00000513074 128 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms