Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA2O43364 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA2O43364 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA2O43364 RPL30P11-203ENST00000598995 310 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 AL021707.8-201ENST00000609428 183 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA2O43364 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXA2O43364 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA2O43364 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
HOXA2O43364 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA2O43364 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA2O43364 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA2O43364 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA2O43364 RNU6-647P-201ENST00000364243 107 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 SNORD58C-201ENST00000365223 64 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXA2O43364 SNORD66.1-201ENST00000391230 76 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 Y_RNA.630-201ENST00000411370 108 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 Y_RNA.651-201ENST00000459380 103 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 RN7SL542P-201ENST00000467147 294 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 AC010598.1-201ENST00000510378 103 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 RNU1-45P-201ENST00000517191 141 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 AP000867.2-201ENST00000532468 320 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXA2O43364 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXA2O43364 RN7SL703P-201ENST00000578485 302 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 MIR4429-201ENST00000580105 73 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 MIR3158-1-201ENST00000583596 81 ntBASIC4.5□□□□□ -1.69
HOXA2O43364 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXA2O43364 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA2O43364 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HOXA2O43364 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA2O43364 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA2O43364 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
HOXA2O43364 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA2O43364 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
HOXA2O43364 Z82217.1-201ENST00000625157 8149 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA2O43364 Y_RNA.35-201ENST00000362601 101 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 MIR300-201ENST00000401138 83 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 RPL39P40-201ENST00000445481 146 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 RNU7-57P-201ENST00000459540 60 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 RPL36AP48-201ENST00000485521 314 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 SNORA67.7-201ENST00000516664 135 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 RNU6-1098P-201ENST00000516772 96 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 MIR4753-201ENST00000585119 83 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 AL049861.1-201ENST00000603130 150 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 MIR7151-201ENST00000617477 60 ntBASIC4.49□□□□□ -1.69
HOXA2O43364 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXA2O43364 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA2O43364 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA2O43364 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA2O43364 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA2O43364 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXA2O43364 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXA2O43364 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 AL356292.1-201ENST00000283110 373 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 SNORD32B-201ENST00000364460 84 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 RNU6-880P-201ENST00000384526 107 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 AL353705.1-201ENST00000433468 480 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 RPS29P7-201ENST00000439662 171 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 AC079598.5-201ENST00000547460 117 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA2O43364 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA2O43364 AC004832.5-201ENST00000608677 401 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 AL138880.2-201ENST00000616214 239 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 MIR6500-201ENST00000622700 86 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 snoZ196.1-201ENST00000625269 89 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA2O43364 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA2O43364 AC008555.8-201ENST00000623602 2168 ntBASIC4.48□□□□□ -1.69
HOXA2O43364 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA2O43364 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA2O43364 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXA2O43364 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA2O43364 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA2O43364 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA2O43364 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXA2O43364 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA2O43364 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXA2O43364 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA2O43364 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA2O43364 PTMAP2-201ENST00000397627 327 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 AL603914.1-201ENST00000401964 204 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 MIR1283-1-201ENST00000408494 87 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 RNU2-70P-201ENST00000410718 179 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 ABCF2P2-201ENST00000450549 296 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 AC010099.1-201ENST00000455434 375 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 AC083906.5-201ENST00000503722 328 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 RNA5SP153-201ENST00000516498 76 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 Y_RNA.690-201ENST00000516603 95 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA2O43364 AC093732.2-201ENST00000607950 274 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
HOXA2O43364 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA2O43364 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA2O43364 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA2O43364 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HOXA2O43364 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms