Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR1294-201ENST00000408503 142 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
PHGDHO43175 MTCO3P19-201ENST00000415864 321 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC003685.2-201ENST00000422795 395 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 CBX3P6-201ENST00000430257 527 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC112220.1-201ENST00000434628 355 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC096638.1-201ENST00000444678 216 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC104389.3-201ENST00000445629 235 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.82□□□□□ -1.96
PHGDHO43175 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 SNORA25.14-201ENST00000516481 132 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 RNU6-1046P-201ENST00000516538 107 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.82□□□□□ -1.96
PHGDHO43175 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.82□□□□□ -1.96
PHGDHO43175 AL355297.2-201ENST00000604792 129 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AL162373.1-201ENST00000620433 407 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.82□□□□□ -1.96
PHGDHO43175 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.82□□□□□ -1.96
PHGDHO43175 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.82□□□□□ -1.96
PHGDHO43175 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PHGDHO43175 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
PHGDHO43175 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.81□□□□□ -1.96
PHGDHO43175 RNU6-450P-201ENST00000364654 107 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 RNU6-245P-201ENST00000384020 107 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 Y_RNA.424-201ENST00000384063 103 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 RNU6-708P-201ENST00000384217 107 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PHGDHO43175 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PHGDHO43175 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 AC022018.1-201ENST00000430685 241 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 AC112492.4-201ENST00000456549 352 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.81□□□□□ -1.96
PHGDHO43175 MIR449C-201ENST00000516047 92 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 SNORA48.11-201ENST00000517015 89 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 SNORA31.26-201ENST00000517250 137 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.81□□□□□ -1.96
PHGDHO43175 AC093023.1-201ENST00000547375 507 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 AC078899.3-201ENST00000599065 212 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 AL449363.1-201ENST00000617815 186 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 MIR3651-201ENST00000630427 90 ntBASIC2.81□□□□□ -1.96
PHGDHO43175 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
PHGDHO43175 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PHGDHO43175 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PHGDHO43175 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PHGDHO43175 RNU6-26P-201ENST00000383985 107 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 RNU6-281P-201ENST00000384212 103 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 Y_RNA.459-201ENST00000384251 102 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 RNA5SP213-201ENST00000391031 106 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 RNU6-985P-201ENST00000410182 104 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 RPL23AP83-201ENST00000434984 473 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 AC004386.2-201ENST00000441858 148 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 MTCO3P8-201ENST00000453691 755 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.8□□□□□ -1.96
PHGDHO43175 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.8□□□□□ -1.96
PHGDHO43175 AL442163.3-201ENST00000554110 156 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.8□□□□□ -1.96
PHGDHO43175 AC023824.2-201ENST00000566185 400 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.8□□□□□ -1.96
PHGDHO43175 MIR5006-201ENST00000583027 110 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 AC125232.2-201ENST00000592457 143 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.8□□□□□ -1.96
PHGDHO43175 TCL6_2.1-201ENST00000615162 119 ntBASIC2.8□□□□□ -1.96
PHGDHO43175 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PHGDHO43175 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PHGDHO43175 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PHGDHO43175 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.79□□□□□ -1.96
PHGDHO43175 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
PHGDHO43175 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PHGDHO43175 MIR422A-201ENST00000362286 90 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 RNU6-1301P-201ENST00000362724 104 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 RNU1-23P-201ENST00000363361 144 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 Y_RNA.145-201ENST00000363527 102 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PHGDHO43175 RNU6-546P-201ENST00000383991 107 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 MIR491-201ENST00000384877 84 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 RNU2-32P-201ENST00000411193 191 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.79□□□□□ -1.96
PHGDHO43175 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.79□□□□□ -1.96
PHGDHO43175 MTATP8P1-201ENST00000467115 207 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.79□□□□□ -1.96
PHGDHO43175 RNU6-965P-201ENST00000516721 96 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 RNU2-44P-201ENST00000516795 194 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 RN7SKP57-201ENST00000517248 293 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.79□□□□□ -1.96
PHGDHO43175 DEFB131C-201ENST00000528817 165 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
PHGDHO43175 AC018630.3-201ENST00000542637 96 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.79□□□□□ -1.96
PHGDHO43175 RPS29P30-201ENST00000600975 111 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 AC136443.5-201ENST00000603741 370 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 AC010999.1-201ENST00000611856 324 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 MIR8057-201ENST00000620957 69 ntBASIC2.79□□□□□ -1.96
PHGDHO43175 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PHGDHO43175 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PHGDHO43175 RNA5SP361-201ENST00000362686 118 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 SNORD14.1-201ENST00000365609 90 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 Y_RNA.389-201ENST00000383924 113 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms