Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.38□□□□□ -2.03
ATP2A1O14983 FGF7P4-201ENST00000509595 295 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.38□□□□□ -2.03
ATP2A1O14983 Y_RNA.708-201ENST00000516950 96 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.38□□□□□ -2.03
ATP2A1O14983 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.38□□□□□ -2.03
ATP2A1O14983 AL355297.2-201ENST00000604792 129 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AC113139.1-201ENST00000605049 239 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AC016727.1-205ENST00000605437 569 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 SNORD14A-201ENST00000606526 91 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AC098657.3-201ENST00000620434 263 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.38□□□□□ -2.03
ATP2A1O14983 MTND5P9-201ENST00000503854 1755 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 RNU4-15P-201ENST00000362613 141 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 Y_RNA.70-201ENST00000362886 110 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 RNU5B-2P-201ENST00000363036 113 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 SNORA29-201ENST00000384183 140 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 SNORA36A-201ENST00000384221 132 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 RNU6-1274P-201ENST00000384557 107 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 SNORA26.9-201ENST00000391322 122 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 MTCYBP2-201ENST00000407745 171 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 Y_RNA.594-201ENST00000410373 140 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 HMGB3P2-201ENST00000411913 584 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 AC007677.1-201ENST00000445757 515 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.37□□□□□ -2.03
ATP2A1O14983 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.37□□□□□ -2.03
ATP2A1O14983 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.37□□□□□ -2.03
ATP2A1O14983 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.37□□□□□ -2.03
ATP2A1O14983 CYP4A27P-201ENST00000567218 190 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 MIR3923-201ENST00000579521 83 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 MIR5002-201ENST00000584713 97 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 LARP7P1-201ENST00000605576 316 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 U4atac.1-201ENST00000618345 95 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 AC233981.2-201ENST00000611524 1614 ntBASIC2.37□□□□□ -2.03
ATP2A1O14983 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATP2A1O14983 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATP2A1O14983 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
ATP2A1O14983 RNU6-1059P-201ENST00000363752 98 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 RNU6-842P-201ENST00000384269 107 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 RNA5SP201-201ENST00000410316 124 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 RNU6-1050P-201ENST00000410388 107 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 RNU4-14P-201ENST00000410858 122 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AL139156.1-201ENST00000412785 841 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AC012306.1-201ENST00000423267 114 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AC145146.1-201ENST00000496370 254 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.36□□□□□ -2.03
ATP2A1O14983 AC021146.2-201ENST00000504736 556 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 RNU6-277P-201ENST00000516272 106 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 MRPS36P4-201ENST00000534436 298 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 MIR4273-201ENST00000582824 84 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AP000654.2-201ENST00000605633 586 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AC025754.2-201ENST00000606491 432 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 AC005520.5-201ENST00000613926 164 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 Y_RNA.804-201ENST00000615262 101 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 MIR1302-1-201ENST00000637932 143 ntBASIC2.36□□□□□ -2.03
ATP2A1O14983 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
ATP2A1O14983 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATP2A1O14983 RNU6-867P-201ENST00000364956 107 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
ATP2A1O14983 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.35□□□□□ -2.03
ATP2A1O14983 AC005741.1-201ENST00000511094 432 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.35□□□□□ -2.03
ATP2A1O14983 RNA5SP182-201ENST00000516064 82 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 RNU6-991P-201ENST00000516168 107 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 Y_RNA.670-201ENST00000516255 105 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 AC018630.3-201ENST00000542637 96 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 MIR5696-201ENST00000578474 85 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 AC009229.3-201ENST00000608056 282 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.35□□□□□ -2.03
ATP2A1O14983 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATP2A1O14983 KPNA2P1-201ENST00000458289 1591 ntBASIC2.35□□□□□ -2.03
ATP2A1O14983 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.35□□□□□ -2.03
ATP2A1O14983 RNU5E-4P-201ENST00000364931 120 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 Y_RNA.529-201ENST00000384586 119 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 MT-TD-201ENST00000387419 68 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 SNORA46.1-201ENST00000391069 153 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 RNU6-370P-201ENST00000411008 104 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 RPS26P42-201ENST00000413485 326 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 AL358453.1-201ENST00000422522 250 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.34□□□□□ -2.03
ATP2A1O14983 FO393415.2-201ENST00000480085 343 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 AF186996.7-201ENST00000492781 209 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 RNU6-295P-201ENST00000516901 104 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
ATP2A1O14983 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.34□□□□□ -2.03
ATP2A1O14983 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.34□□□□□ -2.03
ATP2A1O14983 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
ATP2A1O14983 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.34□□□□□ -2.03
ATP2A1O14983 RPS3AP23-202ENST00000574601 686 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms