Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 HSPE1P18-201ENST00000517602 280 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 APOOP3-201ENST00000536787 586 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR5701-3-201ENST00000578890 82 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR5701-1-201ENST00000585138 82 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RPL17P51-201ENST00000605218 238 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC005014.2-201ENST00000607795 599 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RMST_6.1-201ENST00000611980 203 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR5701-2-201ENST00000615634 82 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL008636.1-201ENST00000625038 1018 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC243829.7-201ENST00000633081 225 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL669831.3-213ENST00000636676 183 ntBASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.95□□□□□ -2.1
TRBV4-1A0A0J9YWV2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Y_RNA.2-201ENST00000362330 96 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU1-76P-201ENST00000362903 159 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Y_RNA.529-201ENST00000384586 119 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU2-41P-201ENST00000410991 178 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 EDDM3CP-201ENST00000415977 425 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 USMG5P1-201ENST00000425964 177 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC107032.1-201ENST00000485945 480 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR449C-201ENST00000516047 92 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 DEFB131C-201ENST00000528817 165 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AP000889.1-201ENST00000530968 660 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL590705.4-201ENST00000532209 134 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC104581.2-201ENST00000572227 430 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SNRPGP17-201ENST00000603780 214 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC016727.2-201ENST00000603988 621 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 PISRT1.1-201ENST00000616930 107 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR1302-1-201ENST00000637932 143 ntBASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MTND5P6-201ENST00000422338 1798 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Y_RNA.48-201ENST00000362710 103 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SNORA3A-201ENST00000364113 130 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Y_RNA.387-201ENST00000383918 102 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-17P-201ENST00000384245 107 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-301P-201ENST00000384277 107 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-18P-201ENST00000384527 107 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL035666.1-201ENST00000446195 348 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 PRELID3BP1-201ENST00000457142 540 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-559P-201ENST00000516151 98 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-1213P-201ENST00000517075 94 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC090517.1-201ENST00000569307 266 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC005899.2-201ENST00000584353 90 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 BX322639.1-202ENST00000423987 2213 ntBASIC1.93□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-1297P-201ENST00000384415 104 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-310P-201ENST00000384655 107 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-331P-201ENST00000384724 107 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR32-201ENST00000384965 70 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR487A-201ENST00000385009 80 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR153-2-201ENST00000385225 87 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SNORA12.2-201ENST00000391040 156 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SRIP3-201ENST00000413200 219 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 IPO7P1-201ENST00000442031 636 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL137159.1-201ENST00000452808 512 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC027288.2-201ENST00000553028 243 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC026470.2-201ENST00000561492 181 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 FRG2DP-202ENST00000566967 323 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL355375.2-201ENST00000574825 175 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR3126-201ENST00000577443 74 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR5690-201ENST00000583739 73 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms